Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   QNH71_RS05300 Genome accession   NZ_OX352941
Coordinates   1082305..1083309 (-) Length   334 a.a.
NCBI ID   WP_004298830.1    Uniprot ID   A0A0H3MYC9
Organism   Streptococcus suis isolate 861160_WT     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1077305..1088309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH71_RS05290 - 1078550..1079548 (-) 999 WP_014637671.1 glycosyltransferase -
  QNH71_RS05295 - 1079859..1081871 (+) 2013 WP_156688697.1 FctA domain-containing protein -
  QNH71_RS05300 ccpA 1082305..1083309 (-) 1005 WP_004298830.1 catabolite control protein A Regulator
  QNH71_RS05305 - 1083519..1084604 (+) 1086 WP_012027315.1 Xaa-Pro peptidase family protein -
  QNH71_RS05310 tgt 1084643..1085785 (-) 1143 WP_012027316.1 tRNA guanosine(34) transglycosylase Tgt -
  QNH71_RS05315 - 1086105..1086947 (+) 843 WP_074390102.1 DUF975 family protein -
  QNH71_RS05320 - 1087242..1087679 (-) 438 WP_012027318.1 CoA-binding protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36786.97 Da        Isoelectric Point: 5.5173

>NTDB_id=1038036 QNH71_RS05300 WP_004298830.1 1082305..1083309(-) (ccpA) [Streptococcus suis isolate 861160_WT]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGIKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1038036 QNH71_RS05300 WP_004298830.1 1082305..1083309(-) (ccpA) [Streptococcus suis isolate 861160_WT]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGCTTGGATTATCGTCCGA
ATGCTGTTGCACGTGGATTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAATATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATTGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTACGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCAGGTCTATTGAACGGTGTCAGTGATATGGGCATCAAGGT
TCCGGAAGATTTTGAAATCATCACAAGTGATGATTCCCTAGTGACTAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATATGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGTAAATCAACTAAGTGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(9-54)

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MYC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

79.88

99.701

0.796
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.279

99.701

0.79
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.912

99.102

0.584

Multiple sequence alignment