Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB339_RS05835 Genome accession   NZ_CP167023
Coordinates   1137834..1138016 (-) Length   60 a.a.
NCBI ID   WP_011054671.1    Uniprot ID   Q4VUT1
Organism   Streptococcus pyogenes strain Isolate 3     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1132834..1143016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB339_RS05820 (ACB339_05815) - 1133273..1133968 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  ACB339_RS05825 (ACB339_05820) - 1134207..1135142 (+) 936 WP_011054669.1 dihydroorotate oxidase -
  ACB339_RS05830 (ACB339_05825) - 1135442..1137304 (-) 1863 WP_011054670.1 heavy metal translocating P-type ATPase -
  ACB339_RS05835 (ACB339_05830) prx 1137834..1138016 (-) 183 WP_011054671.1 hypothetical protein Regulator
  ACB339_RS05840 (ACB339_05835) - 1138083..1138877 (-) 795 WP_002983479.1 DNA/RNA non-specific endonuclease -
  ACB339_RS05845 (ACB339_05840) - 1139122..1140336 (-) 1215 WP_002983477.1 peptidoglycan amidohydrolase family protein -
  ACB339_RS05850 (ACB339_05845) - 1140448..1140903 (-) 456 WP_002983475.1 phage holin family protein -
  ACB339_RS05855 (ACB339_05850) - 1140914..1141528 (-) 615 WP_011054672.1 DUF1366 domain-containing protein -
  ACB339_RS05860 (ACB339_05855) - 1141531..1141962 (-) 432 WP_011054673.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6978.99 Da        Isoelectric Point: 4.3466

>NTDB_id=1038031 ACB339_RS05835 WP_011054671.1 1137834..1138016(-) (prx) [Streptococcus pyogenes strain Isolate 3]
MLTYDEFKQAIDRGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1038031 ACB339_RS05835 WP_011054671.1 1137834..1138016(-) (prx) [Streptococcus pyogenes strain Isolate 3]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGACCGTGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5

Multiple sequence alignment