Detailed information NTG1038024

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: QNH71_RS04070
• Genome accession: NZ_OX352941
• Coordinates: 829061..829732 (-)
• Length: 223 a.a.
• NCBI ID: WP_009909965.1
• Uniprot ID: -
• Organism: Streptococcus suis isolate 861160_WT
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 824061..834732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH71_RS04050	coaA	824647..825567 (+)	921	WP_074390257.1	type I pantothenate kinase	-
QNH71_RS04055	rpsT	825626..825874 (+)	249	WP_012027069.1	30S ribosomal protein S20	-
QNH71_RS04060	-	826136..827365 (-)	1230	WP_024417479.1	transglutaminase domain-containing protein	-
QNH71_RS04065	ciaH	827689..829068 (-)	1380	WP_002935290.1	HAMP domain-containing sensor histidine kinase	Regulator
QNH71_RS04070	ciaR	829061..829732 (-)	672	WP_009909965.1	response regulator transcription factor	Regulator
QNH71_RS04075	-	829926..830114 (-)	189	WP_226313374.1	hypothetical protein	-
QNH71_RS04080	-	830172..830306 (-)	135	WP_255304292.1	hypothetical protein	-
QNH71_RS04085	phoU	830472..831128 (-)	657	WP_012028219.1	phosphate signaling complex protein PhoU	-
QNH71_RS04090	pstB	831157..831915 (-)	759	WP_002937614.1	phosphate ABC transporter ATP-binding protein PstB	-
QNH71_RS04095	pstB	831927..832730 (-)	804	WP_002940866.1	phosphate ABC transporter ATP-binding protein PstB	-
QNH71_RS04100	pstA	832755..833642 (-)	888	WP_002937616.1	phosphate ABC transporter permease PstA	-
QNH71_RS04105	pstC	833632..834549 (-)	918	WP_002937619.1	phosphate ABC transporter permease subunit PstC	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 25290.00 Da
• Isoelectric Point: 4.2183

>NTDB_id=1038024 QNH71_RS04070 WP_009909965.1 829061..829732(-) (ciaR) [Streptococcus suis isolate 861160_WT]
MIKILLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGVYEAETGVYDLILLDLMLPEKDGFQVLKELREKGVTTPVLITTA
KESLEDKGHGFELGADDYLTKPFYLEELKMRIQALLKRAGKFNENTLTFGDVTVDLSTNMTMVNGEEVELLGKEFDLLVY
FLQNQNVILPKTQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTTFGENLQTLRSVGYILKNA

Nucleotide

• Length: 672 bp

>NTDB_id=1038024 QNH71_RS04070 WP_009909965.1 829061..829732(-) (ciaR) [Streptococcus suis isolate 861160_WT]
ATGATTAAAATATTGTTAGTGGAAGATGATTTAAGCCTATCAAATTCTGTTTTCGATTTCTTAGATGATTTTGCGGATGT
TATGCAGGTTTTTGATGGTGAAGAGGGCGTTTATGAGGCGGAAACAGGCGTTTATGATTTGATTCTTTTGGATTTAATGT
TGCCTGAAAAAGATGGCTTCCAAGTTTTGAAAGAATTACGTGAAAAAGGTGTTACGACACCTGTTCTGATTACAACAGCC
AAGGAAAGTCTAGAGGATAAAGGCCATGGTTTTGAATTGGGGGCTGATGACTATTTGACAAAACCGTTTTATTTAGAAGA
ATTGAAGATGCGAATTCAAGCTCTATTAAAACGAGCGGGTAAGTTTAATGAAAACACACTAACCTTTGGAGATGTGACAG
TTGACCTATCTACAAATATGACGATGGTAAATGGCGAAGAAGTTGAACTGCTAGGAAAAGAATTTGATCTACTAGTTTAT
TTCTTGCAAAATCAAAATGTTATTTTGCCAAAAACACAAATTTTTGACCGTATTTGGGGCTTTGACAGTGATACTACAAT
TTCAGTAGTAGAAGTATATGTTTCTAAAATTAGGAAAAAGTTGAAAGGAACGACCTTCGGGGAAAATCTTCAAACCCTGC
GTAGTGTCGGGTACATTCTAAAAAATGCCTAA

Domains

Predicted by InterProScan.

• Response regulator receiver domain (Response_reg) (4-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	90.135	100	0.901
ciaR	Streptococcus pneumoniae Rx1	88.341	100	0.883
ciaR	Streptococcus pneumoniae D39	88.341	100	0.883
ciaR	Streptococcus pneumoniae R6	88.341	100	0.883
ciaR	Streptococcus pneumoniae TIGR4	88.341	100	0.883
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.496	100	0.39
vicR	Streptococcus mutans UA159	35.47	100	0.372
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.363