Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB335_RS03320 Genome accession   NZ_CP167022
Coordinates   613052..613231 (+) Length   59 a.a.
NCBI ID   WP_063812990.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 4     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 608052..618231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB335_RS03290 (ACB335_03290) - 608469..608744 (+) 276 WP_002987582.1 hypothetical protein -
  ACB335_RS03295 (ACB335_03295) - 608741..608968 (+) 228 WP_000609113.1 phage holin -
  ACB335_RS03300 (ACB335_03300) - 609084..610301 (+) 1218 WP_063812989.1 peptidoglycan amidohydrolase family protein -
  ACB335_RS03305 (ACB335_03305) - 610595..611566 (+) 972 WP_011888780.1 Abi family protein -
  ACB335_RS03310 (ACB335_03310) - 611751..611951 (+) 201 WP_003058228.1 CsbD family protein -
  ACB335_RS03315 (ACB335_03315) - 612013..612813 (-) 801 WP_021340119.1 DNA/RNA non-specific endonuclease -
  ACB335_RS03320 (ACB335_03320) prx 613052..613231 (+) 180 WP_063812990.1 hypothetical protein Regulator
  ACB335_RS03325 (ACB335_03325) - 613413..613697 (-) 285 Protein_606 site-specific integrase -
  ACB335_RS03330 (ACB335_03330) - 613702..613967 (+) 266 Protein_607 rod shape-determining protein RodA -
  ACB335_RS03335 (ACB335_03335) - 614070..614630 (+) 561 WP_023612339.1 HAD-IA family hydrolase -
  ACB335_RS03340 (ACB335_03340) gyrB 614631..616583 (+) 1953 WP_011017600.1 DNA topoisomerase (ATP-hydrolyzing) subunit B -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6909.90 Da        Isoelectric Point: 4.0548

>NTDB_id=1037969 ACB335_RS03320 WP_063812990.1 613052..613231(+) (prx) [Streptococcus pyogenes strain Isolate 4]
MLTYDEFKQAIDNGYITADTVMIVRKDGQIFDYVLPGEPVRLWEVATEEKVEGVMRELW

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1037969 ACB335_RS03320 WP_063812990.1 613052..613231(+) (prx) [Streptococcus pyogenes strain Isolate 4]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAGAAGGTGGAAGGAG
TGATGAGGGAATTGTGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

77.586

98.305

0.763
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

75.862

98.305

0.746
  prx Streptococcus pyogenes MGAS315

87.805

69.492

0.61
  prx Streptococcus pyogenes MGAS315

82.927

69.492

0.576
  prx Streptococcus pyogenes MGAS315

73.171

69.492

0.508

Multiple sequence alignment