Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   ACB355_RS06730 Genome accession   NZ_CP167011
Coordinates   1336096..1336278 (-) Length   60 a.a.
NCBI ID   WP_011018104.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 18     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1331096..1341278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB355_RS06720 (ACB355_06720) rocA 1332531..1333886 (-) 1356 WP_002988979.1 transcriptional regulator RocA -
  ACB355_RS06725 (ACB355_06725) rlmD 1334550..1335905 (-) 1356 WP_023079352.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  ACB355_RS06730 (ACB355_06730) prx 1336096..1336278 (-) 183 WP_011018104.1 hypothetical protein Regulator
  ACB355_RS06735 (ACB355_06735) mf2 1336551..1337309 (+) 759 WP_011184727.1 DNase Mf2 -
  ACB355_RS06740 (ACB355_06740) speC 1337420..1338127 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  ACB355_RS06745 (ACB355_06745) - 1338739..1339948 (-) 1210 Protein_1285 glucosaminidase domain-containing protein -
  ACB355_RS06750 (ACB355_06750) - 1340060..1340515 (-) 456 WP_002988455.1 phage holin family protein -
  ACB355_RS06755 (ACB355_06755) - 1340531..1341157 (-) 627 WP_115224617.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6935.81 Da        Isoelectric Point: 3.9417

>NTDB_id=1037433 ACB355_RS06730 WP_011018104.1 1336096..1336278(-) (prx) [Streptococcus pyogenes strain Isolate 18]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPHEEARNGEVVTEEVVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1037433 ACB355_RS06730 WP_011018104.1 1336096..1336278(-) (prx) [Streptococcus pyogenes strain Isolate 18]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGCGAGAAATGGAGAAGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817
  prx Streptococcus pyogenes MGAS8232

80

100

0.8
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

93.023

71.667

0.667

Multiple sequence alignment