Detailed information NTG1037056

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACB354_RS08260
• Genome accession: NZ_CP167004
• Coordinates: 1566119..1566709 (-)
• Length: 196 a.a.
• NCBI ID: WP_002985850.1
• Uniprot ID: A0A9X8T4H8
• Organism: Streptococcus pyogenes strain Isolate 28
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1561119..1571709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB354_RS08225 (ACB354_08230)	-	1561303..1561695 (-)	393	WP_011184218.1	DUF5684 domain-containing protein	-
ACB354_RS08230 (ACB354_08235)	rsmI	1561722..1562585 (-)	864	WP_011184217.1	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	-
ACB354_RS08235 (ACB354_08240)	yabA	1562590..1562913 (-)	324	WP_002985838.1	DNA replication initiation control protein YabA	-
ACB354_RS08240 (ACB354_08245)	-	1563317..1563556 (-)	240	WP_011017422.1	hypothetical protein	-
ACB354_RS08245 (ACB354_08250)	-	1563575..1564450 (-)	876	WP_002985844.1	DNA polymerase III subunit delta'	-
ACB354_RS08250 (ACB354_08255)	tmk	1564468..1565103 (-)	636	WP_011184214.1	dTMP kinase	-
ACB354_RS08255 (ACB354_08260)	-	1565352..1565627 (-)	276	WP_002985847.1	YlbG family protein	-
ACB354_RS08260 (ACB354_08265)	clpP	1566119..1566709 (-)	591	WP_002985850.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACB354_RS08265 (ACB354_08270)	upp	1566933..1567562 (-)	630	WP_002985854.1	uracil phosphoribosyltransferase	-
ACB354_RS08270 (ACB354_08275)	-	1567729..1569363 (-)	1635	WP_011184213.1	polysaccharide biosynthesis protein	-
ACB354_RS08275 (ACB354_08280)	-	1569451..1570896 (+)	1446	WP_011184212.1	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21648.88 Da
• Isoelectric Point: 5.2834

>NTDB_id=1037056 ACB354_RS08260 WP_002985850.1 1566119..1566709(-) (clpP) [Streptococcus pyogenes strain Isolate 28]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1037056 ACB354_RS08260 WP_002985850.1 1566119..1566709(-) (clpP) [Streptococcus pyogenes strain Isolate 28]
ATGATTCCTGTTGTTATTGAACAAACTAGCCGTGGAGAACGTTCTTATGACATTTATTCACGTTTATTAAAAGACCGTAT
TATCATGTTAACAGGGCCTGTCGAAGACAACATGGCCAACTCTGTCATAGCGCAGCTCTTATTCCTTGACGCGCAAGACA
ACACTAAAGATATCTACCTATATGTCAACACACCAGGTGGCTCTGTCTCAGCAGGCTTGGCTATTGTCGATACCATGAAC
TTTATCAAGGCCGATGTGCAAACTATTGTCATGGGTATGGCAGCTTCTATGGGGACAGTCATTGCTTCATCAGGAACAAA
AGGCAAACGCTTTATGTTACCAAATGCAGAGTATATGATCCACCAGCCAATGGGTGGCACAGGCGGTGGCACGCAACAAA
CGGATATGGCTATCGCAGCAGAACATCTCTTAAAAACACGTCACCGTTTAGAAAAAATCTTAGCGCAAAATGCTGGAAAA
ACGATTAAACAAATCCATAAAGATGCTGAGCGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAACAACGAACTAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes MGAS315	100	100	1
clpP	Streptococcus pyogenes JRS4	100	100	1
clpP	Streptococcus mutans UA159	90.816	100	0.908
clpP	Streptococcus pneumoniae Rx1	90.769	99.49	0.903
clpP	Streptococcus pneumoniae D39	90.769	99.49	0.903
clpP	Streptococcus pneumoniae R6	90.769	99.49	0.903
clpP	Streptococcus pneumoniae TIGR4	90.769	99.49	0.903
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	86.224	100	0.862
clpP	Lactococcus lactis subsp. cremoris KW2	85.714	100	0.857
clpP	Bacillus subtilis subsp. subtilis str. 168	57.143	100	0.571
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561