Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   ACB348_RS04810 Genome accession   NZ_CP167002
Coordinates   908709..908897 (+) Length   62 a.a.
NCBI ID   WP_002993136.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 30     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 903709..913897
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB348_RS04775 (ACB348_04780) - 903831..904262 (+) 432 WP_002987513.1 DUF1617 family protein -
  ACB348_RS04780 (ACB348_04785) - 904265..904882 (+) 618 WP_371392160.1 DUF1366 domain-containing protein -
  ACB348_RS04785 (ACB348_04790) - 904893..905189 (+) 297 WP_002990012.1 hypothetical protein -
  ACB348_RS04790 (ACB348_04795) - 905186..905371 (+) 186 WP_011284839.1 holin -
  ACB348_RS04795 (ACB348_04800) - 905483..906817 (+) 1335 WP_011284838.1 GH25 family lysozyme -
  ACB348_RS04800 (ACB348_04805) speC 906893..907600 (-) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  ACB348_RS04805 (ACB348_04810) mf2 907711..908469 (-) 759 WP_011184727.1 DNase Mf2 -
  ACB348_RS04810 (ACB348_04815) prx 908709..908897 (+) 189 WP_002993136.1 hypothetical protein Regulator
  ACB348_RS04820 (ACB348_04825) - 909488..910102 (+) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  ACB348_RS04825 (ACB348_04830) - 910235..911020 (-) 786 WP_002989610.1 hypothetical protein -
  ACB348_RS04830 (ACB348_04835) - 911030..911728 (-) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  ACB348_RS04835 (ACB348_04840) - 911728..912099 (-) 372 WP_002989617.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7239.28 Da        Isoelectric Point: 3.9944

>NTDB_id=1036926 ACB348_RS04810 WP_002993136.1 908709..908897(+) (prx) [Streptococcus pyogenes strain Isolate 30]
MLTYDEFKQAIDNGYITGDTVIIVRKNGQIFDYVLPGEKVRPWEVVTEEVVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1036926 ACB348_RS04810 WP_002993136.1 908709..908897(+) (prx) [Streptococcus pyogenes strain Isolate 30]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTAATAATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGCCTGGTGAGAAAGTCAGACCATGGGAGGTTGTGACCGAGGAGGTAGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85.484

100

0.855

  prx Streptococcus pyogenes MGAS8232

82.759

93.548

0.774

  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774

  prx Streptococcus pyogenes MGAS315

81.356

95.161

0.774

  prx Streptococcus pyogenes MGAS315

79.31

93.548

0.742

  prx Streptococcus pyogenes MGAS315

95.238

67.742

0.645

  prx Streptococcus pyogenes MGAS315

80.488

66.129

0.532


Multiple sequence alignment