Detailed information NTG1036439

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ACA346_RS07185
• Genome accession: NZ_CP166970
• Coordinates: 1398870..1399460 (-)
• Length: 196 a.a.
• NCBI ID: WP_130555153.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain NX1
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1393870..1404460

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA346_RS07160 (ACA346_07160)	-	1394250..1395014 (-)	765	WP_418126576.1	ABC transporter ATP-binding protein	-
ACA346_RS07165 (ACA346_07165)	-	1395014..1395961 (-)	948	WP_418126577.1	branched-chain amino acid ABC transporter permease	-
ACA346_RS07170 (ACA346_07170)	-	1395964..1396851 (-)	888	WP_418126578.1	branched-chain amino acid ABC transporter permease	-
ACA346_RS07175 (ACA346_07175)	-	1397132..1398301 (-)	1170	WP_418126579.1	ABC transporter substrate-binding protein	-
ACA346_RS07180 (ACA346_07180)	-	1398466..1398753 (-)	288	WP_130555154.1	DUF2129 domain-containing protein	-
ACA346_RS07185 (ACA346_07185)	clpP	1398870..1399460 (-)	591	WP_130555153.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ACA346_RS07190 (ACA346_07190)	upp	1399842..1400471 (-)	630	WP_024391947.1	uracil phosphoribosyltransferase	-
ACA346_RS07195 (ACA346_07195)	-	1400551..1402167 (-)	1617	WP_418126580.1	glycoside hydrolase family 13 protein	-
ACA346_RS07200 (ACA346_07200)	gtfA	1402239..1403687 (-)	1449	WP_418126581.1	sucrose phosphorylase	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21599.78 Da
• Isoelectric Point: 5.0273

>NTDB_id=1036439 ACA346_RS07185 WP_130555153.1 1398870..1399460(-) (clpP) [Streptococcus parasuis strain NX1]
MIPIVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYLYINTPGGSVSAGLAIVDTMN
FIKADVQTIVMGTAASMGTIIASSGTKGKRFMLPNAEYMIHQPMGGTGSGTQQTDMAIAAEHLLKTRNKLEKILAENSGK
TVEQIHKDAERDYWMSAEETLAYGFIDQIMDNTKTK

Nucleotide

• Length: 591 bp

>NTDB_id=1036439 ACA346_RS07185 WP_130555153.1 1398870..1399460(-) (clpP) [Streptococcus parasuis strain NX1]
ATGATTCCAATAGTTATTGAACAAACTAGTCGCGGTGAGCGCTCGTATGATATTTATTCACGTTTGCTGAAAGACCGCAT
CATTATGTTGACAGGTCCGGTTGAGGACAATATGGCCAATTCGATTATTGCCCAATTGCTTTTCCTAGATGCACAAGATC
CAACAAAAGATATTTATCTCTATATAAATACACCAGGGGGTTCTGTTTCTGCAGGTCTTGCCATCGTGGATACAATGAAC
TTCATTAAAGCAGACGTACAGACAATTGTAATGGGTACTGCAGCAAGTATGGGAACAATCATTGCTTCAAGTGGTACAAA
AGGCAAACGTTTCATGCTTCCTAATGCAGAATACATGATTCACCAACCAATGGGAGGCACTGGTAGTGGTACTCAGCAAA
CTGACATGGCTATTGCAGCAGAACACCTCTTAAAAACTCGTAACAAGTTAGAAAAAATCTTGGCGGAAAATTCAGGTAAG
ACAGTTGAACAAATCCATAAGGATGCAGAACGTGACTATTGGATGTCTGCTGAAGAAACCTTGGCATACGGCTTTATCGA
CCAAATTATGGATAATACAAAGACTAAGTAG

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pyogenes JRS4	90.816	100	0.908
clpP	Streptococcus pyogenes MGAS315	90.816	100	0.908
clpP	Streptococcus mutans UA159	88.265	100	0.883
clpP	Streptococcus thermophilus LMD-9	87.755	100	0.878
clpP	Streptococcus thermophilus LMG 18311	87.755	100	0.878
clpP	Streptococcus pneumoniae R6	89.583	97.959	0.878
clpP	Streptococcus pneumoniae Rx1	89.583	97.959	0.878
clpP	Streptococcus pneumoniae D39	89.583	97.959	0.878
clpP	Streptococcus pneumoniae TIGR4	89.583	97.959	0.878
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.184	100	0.842
clpP	Lactococcus lactis subsp. cremoris KW2	83.673	100	0.837
clpP	Bacillus subtilis subsp. subtilis str. 168	59.184	100	0.592
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571