Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABKQ09_RS17215 | Genome accession | NZ_CP166870 |
| Coordinates | 3427405..3428001 (+) | Length | 198 a.a. |
| NCBI ID | WP_003326811.1 | Uniprot ID | A0AAP3CU21 |
| Organism | Bacillus atrophaeus strain F4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3422405..3433001
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKQ09_RS17180 (ABKQ09_17175) | aspP | 3422776..3424338 (+) | 1563 | WP_003326818.1 | aspartate/proton symporter AspP | - |
| ABKQ09_RS17185 (ABKQ09_17180) | - | 3424443..3425027 (+) | 585 | WP_003326817.1 | TetR family transcriptional regulator | - |
| ABKQ09_RS17190 (ABKQ09_17185) | - | 3425109..3425444 (+) | 336 | WP_061669209.1 | multidrug efflux SMR transporter | - |
| ABKQ09_RS17195 (ABKQ09_17190) | - | 3425444..3425758 (+) | 315 | WP_010790012.1 | multidrug efflux SMR transporter | - |
| ABKQ09_RS17200 (ABKQ09_17195) | speG | 3425784..3426311 (+) | 528 | WP_003326814.1 | spermidine N1-acetyltransferase | - |
| ABKQ09_RS17205 (ABKQ09_17200) | - | 3426398..3426883 (-) | 486 | WP_061570755.1 | DinB family protein | - |
| ABKQ09_RS17215 (ABKQ09_17210) | clpP | 3427405..3428001 (+) | 597 | WP_003326811.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ABKQ09_RS17220 (ABKQ09_17215) | - | 3428035..3428643 (-) | 609 | WP_061669208.1 | DJ-1/PfpI family protein | - |
| ABKQ09_RS17225 (ABKQ09_17220) | - | 3428729..3429304 (-) | 576 | WP_061669207.1 | TIGR00730 family Rossman fold protein | - |
| ABKQ09_RS17230 (ABKQ09_17225) | - | 3429419..3429739 (+) | 321 | WP_003326808.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| ABKQ09_RS17235 (ABKQ09_17230) | - | 3429765..3431375 (-) | 1611 | WP_003326807.1 | SulP family inorganic anion transporter | - |
| ABKQ09_RS17240 (ABKQ09_17235) | - | 3431394..3431978 (-) | 585 | WP_010790017.1 | carbonic anhydrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21877.15 Da Isoelectric Point: 4.7114
>NTDB_id=1035782 ABKQ09_RS17215 WP_003326811.1 3427405..3428001(+) (clpP) [Bacillus atrophaeus strain F4]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=1035782 ABKQ09_RS17215 WP_003326811.1 3427405..3428001(+) (clpP) [Bacillus atrophaeus strain F4]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTGTCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.455 |
100 |
0.955 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus thermophilus LMD-9 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.124 |
97.98 |
0.53 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |