Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AB6911_RS18085 | Genome accession | NZ_CP166481 |
| Coordinates | 3527282..3527878 (+) | Length | 198 a.a. |
| NCBI ID | WP_003326811.1 | Uniprot ID | A0AAP3CU21 |
| Organism | Bacillus atrophaeus strain globigii | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3522282..3532878
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB6911_RS18050 (AB6911_18020) | aspP | 3522652..3524214 (+) | 1563 | WP_003326818.1 | aspartate/proton symporter AspP | - |
| AB6911_RS18055 (AB6911_18025) | - | 3524319..3524903 (+) | 585 | WP_003326817.1 | TetR family transcriptional regulator | - |
| AB6911_RS18060 (AB6911_18030) | - | 3524985..3525320 (+) | 336 | WP_003326816.1 | multidrug efflux SMR transporter | - |
| AB6911_RS18065 (AB6911_18035) | - | 3525320..3525634 (+) | 315 | WP_003326815.1 | multidrug efflux SMR transporter | - |
| AB6911_RS18070 (AB6911_18040) | speG | 3525660..3526187 (+) | 528 | WP_003326814.1 | spermidine N1-acetyltransferase | - |
| AB6911_RS18075 (AB6911_18045) | - | 3526273..3526758 (-) | 486 | WP_003326812.1 | DinB family protein | - |
| AB6911_RS18085 (AB6911_18055) | clpP | 3527282..3527878 (+) | 597 | WP_003326811.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AB6911_RS18090 (AB6911_18060) | - | 3527912..3528520 (-) | 609 | WP_003326810.1 | DJ-1/PfpI family protein | - |
| AB6911_RS18095 (AB6911_18065) | - | 3528605..3529180 (-) | 576 | WP_003326809.1 | TIGR00730 family Rossman fold protein | - |
| AB6911_RS18100 (AB6911_18070) | - | 3529295..3529615 (+) | 321 | WP_003326808.1 | MazG nucleotide pyrophosphohydrolase domain-containing protein | - |
| AB6911_RS18105 (AB6911_18075) | - | 3529641..3531251 (-) | 1611 | WP_003326807.1 | SulP family inorganic anion transporter | - |
| AB6911_RS18110 (AB6911_18080) | - | 3531270..3531854 (-) | 585 | WP_003326806.1 | carbonic anhydrase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21877.15 Da Isoelectric Point: 4.7114
>NTDB_id=1034696 AB6911_RS18085 WP_003326811.1 3527282..3527878(+) (clpP) [Bacillus atrophaeus strain globigii]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEAMEYGLIDKVLTRNTEEQK
Nucleotide
Download Length: 597 bp
>NTDB_id=1034696 AB6911_RS18085 WP_003326811.1 3527282..3527878(+) (clpP) [Bacillus atrophaeus strain globigii]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCATATGACATTTACTCTCGTCTATTGAAGGA
CCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTAGAAGCAG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGTTCCATCACTGCCGGTATGGCGATTTATGATACC
ATGCAGTTTATTAAGCCAAAGGTATCTACAATTTGTATCGGTATGGCTGCATCAATGGGTGCGTTCCTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCTAACAGTGAAGTTATGATTCACCAACCGCTTGGCGGAGCGCAAGGTCAGGCAA
CGGAAATCGAGATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGCACAGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACTGACCGCGATAACTTCAAATCAGCCGAAGAAGCAATGGAATACGGCTTGATTGA
TAAGGTTTTGACACGCAACACTGAAGAACAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.455 |
100 |
0.955 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus thermophilus LMD-9 |
58.031 |
97.475 |
0.566 |
| clpP | Streptococcus pneumoniae Rx1 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae D39 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae R6 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pneumoniae TIGR4 |
56.701 |
97.98 |
0.556 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.186 |
97.98 |
0.551 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus mutans UA159 |
54.124 |
97.98 |
0.53 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.124 |
97.98 |
0.53 |