Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AB8O67_RS18460 | Genome accession | NZ_CP166053 |
| Coordinates | 3535028..3535624 (+) | Length | 198 a.a. |
| NCBI ID | WP_044159265.1 | Uniprot ID | - |
| Organism | Bacillus halotolerans strain XYK2-4 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3530028..3540624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8O67_RS18430 (AB8O67_18425) | aspP | 3530990..3532552 (+) | 1563 | WP_326139374.1 | aspartate/proton symporter AspP | - |
| AB8O67_RS18435 (AB8O67_18430) | - | 3532648..3533232 (+) | 585 | WP_044159262.1 | TetR family transcriptional regulator | - |
| AB8O67_RS18440 (AB8O67_18435) | - | 3533310..3533645 (+) | 336 | WP_059292697.1 | multidrug efflux SMR transporter | - |
| AB8O67_RS18445 (AB8O67_18440) | - | 3533645..3533959 (+) | 315 | WP_024122952.1 | multidrug efflux SMR transporter | - |
| AB8O67_RS18450 (AB8O67_18445) | - | 3534005..3534520 (-) | 516 | WP_024122953.1 | DUF3231 family protein | - |
| AB8O67_RS18460 (AB8O67_18455) | clpP | 3535028..3535624 (+) | 597 | WP_044159265.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AB8O67_RS18465 (AB8O67_18460) | pgmB | 3535742..3536422 (-) | 681 | WP_369888343.1 | beta-phosphoglucomutase | - |
| AB8O67_RS18470 (AB8O67_18465) | - | 3536419..3538104 (-) | 1686 | WP_369888344.1 | alpha-glucosidase | - |
| AB8O67_RS18475 (AB8O67_18470) | - | 3538097..3540370 (-) | 2274 | WP_326139371.1 | glycoside hydrolase family 65 protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21845.09 Da Isoelectric Point: 4.7048
>NTDB_id=1033227 AB8O67_RS18460 WP_044159265.1 3535028..3535624(+) (clpP) [Bacillus halotolerans strain XYK2-4]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTRNSEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTRNSEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=1033227 AB8O67_RS18460 WP_044159265.1 3535028..3535624(+) (clpP) [Bacillus halotolerans strain XYK2-4]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTTTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGAAGCGG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGCTCTATCACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCTTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGAGCTCAAGGTCAAGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTCTGACTCGCAACTCAGAAGATCAAAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGGGAAAGAGCGTATGACATTTATTCTCGTTTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGAAGCGG
AAGACCCTGAAAAAGATATTTCTATTTACATCAACAGCCCGGGCGGCTCTATCACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCTTGCTTGCTGCCGG
AGAAAAAGGCAAACGCTATGCGCTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGAGCTCAAGGTCAAGCGA
CAGAAATTGAAATTGCCGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTTGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGCGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTCTGACTCGCAACTCAGAAGATCAAAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
96.465 |
100 |
0.965 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.063 |
96.465 |
0.657 |
| clpP | Streptococcus thermophilus LMG 18311 |
59.067 |
97.475 |
0.576 |
| clpP | Streptococcus thermophilus LMD-9 |
59.067 |
97.475 |
0.576 |
| clpP | Streptococcus pneumoniae D39 |
58.247 |
97.98 |
0.571 |
| clpP | Streptococcus pneumoniae Rx1 |
58.247 |
97.98 |
0.571 |
| clpP | Streptococcus pneumoniae R6 |
58.247 |
97.98 |
0.571 |
| clpP | Streptococcus pneumoniae TIGR4 |
58.247 |
97.98 |
0.571 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.732 |
97.98 |
0.566 |
| clpP | Streptococcus pyogenes JRS4 |
56.477 |
97.475 |
0.551 |
| clpP | Streptococcus pyogenes MGAS315 |
56.477 |
97.475 |
0.551 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.67 |
97.98 |
0.545 |
| clpP | Streptococcus mutans UA159 |
55.155 |
97.98 |
0.54 |