Detailed information NTG1030692

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AB6L51_RS16775
• Genome accession: NZ_CP163562
• Coordinates: 3224246..3224827 (-)
• Length: 193 a.a.
• NCBI ID: WP_234717161.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain BC255T1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3219246..3229827

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6L51_RS16740 (AB6L51_16735)	fliW	3219382..3219816 (-)	435	WP_007499985.1	flagellar assembly protein FliW	-
AB6L51_RS16745 (AB6L51_16740)	-	3219845..3220423 (-)	579	WP_035701576.1	DUF6470 family protein	-
AB6L51_RS16750 (AB6L51_16745)	flgL	3220470..3221381 (-)	912	WP_017368141.1	flagellar hook-associated protein FlgL	-
AB6L51_RS16755 (AB6L51_16750)	flgK	3221390..3222910 (-)	1521	WP_017368142.1	flagellar hook-associated protein FlgK	-
AB6L51_RS16760 (AB6L51_16755)	-	3222926..3223408 (-)	483	WP_007499977.1	flagellar protein FlgN	-
AB6L51_RS16765 (AB6L51_16760)	flgM	3223427..3223690 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
AB6L51_RS16770 (AB6L51_16765)	-	3223770..3224189 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AB6L51_RS16775 (AB6L51_16770)	comFC	3224246..3224827 (-)	582	WP_234717161.1	ComF family protein	Machinery gene
AB6L51_RS16780 (AB6L51_16775)	-	3224929..3225222 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
AB6L51_RS16785 (AB6L51_16780)	comFA	3225287..3226666 (-)	1380	WP_142675479.1	DEAD/DEAH box helicase	Machinery gene
AB6L51_RS16790 (AB6L51_16785)	-	3226786..3227628 (-)	843	WP_024719242.1	DegV family protein	-
AB6L51_RS16795 (AB6L51_16790)	degU	3227840..3228529 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB6L51_RS16800 (AB6L51_16795)	degS	3228594..3229769 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 22019.79 Da
• Isoelectric Point: 10.6818

>NTDB_id=1030692 AB6L51_RS16775 WP_234717161.1 3224246..3224827(-) (comFC) [Bacillus altitudinis strain BC255T1]
MKIQGPTCPKCGRAQLNDQLCQDCSRWNKRRDFAEILVMNRSVYAYNDFMKDILARFKFRGDTALADLFKKDVQSAFKRS
FSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVHQSKQSKKRKNERLHQQNLFQLRQSNPIVLKDVVLI
DDIYTTGATVYHAAKILKGAGAKSVSSFTLIRS

Nucleotide

• Length: 582 bp

>NTDB_id=1030692 AB6L51_RS16775 WP_234717161.1 3224246..3224827(-) (comFC) [Bacillus altitudinis strain BC255T1]
ATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATTAAATGATCAATTGTGTCAGGATTGTTCAAGGTG
GAATAAACGACGGGATTTTGCTGAGATTCTTGTGATGAATCGATCTGTTTATGCTTACAACGACTTTATGAAAGATATTC
TAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGATGTACAGTCAGCGTTTAAACGTTCT
TTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAAAGGAAAGAGGATTCAATCAGTCAAT
GATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACATCAAAGTAAGCAGTCTAAGAAAAGAA
AAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGATCGTTCTAAAGGATGTCGTGTTAATC
GATGACATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAGGAGCAGGCGCCAAAAGTGTTTCCTC
TTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (126-191)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.777	100	0.508
comFC/cflB	Streptococcus mitis SK321	39.267	98.964	0.389
comFC/cflB	Streptococcus mitis NCTC 12261	38.743	98.964	0.383
comFC/cflB	Streptococcus pneumoniae R6	38.22	98.964	0.378
comFC/cflB	Streptococcus pneumoniae TIGR4	38.22	98.964	0.378
comFC/cflB	Streptococcus pneumoniae Rx1	38.22	98.964	0.378
comFC/cflB	Streptococcus pneumoniae D39	38.22	98.964	0.378