Detailed information NTG1030695

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB6L51_RS16800
• Genome accession: NZ_CP163562
• Coordinates: 3228594..3229769 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain BC255T1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3223594..3234769

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6L51_RS16770 (AB6L51_16765)	-	3223770..3224189 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
AB6L51_RS16775 (AB6L51_16770)	comFC	3224246..3224827 (-)	582	WP_234717161.1	ComF family protein	Machinery gene
AB6L51_RS16780 (AB6L51_16775)	-	3224929..3225222 (-)	294	WP_035701582.1	late competence development ComFB family protein	-
AB6L51_RS16785 (AB6L51_16780)	comFA	3225287..3226666 (-)	1380	WP_142675479.1	DEAD/DEAH box helicase	Machinery gene
AB6L51_RS16790 (AB6L51_16785)	-	3226786..3227628 (-)	843	WP_024719242.1	DegV family protein	-
AB6L51_RS16795 (AB6L51_16790)	degU	3227840..3228529 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AB6L51_RS16800 (AB6L51_16795)	degS	3228594..3229769 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AB6L51_RS16805 (AB6L51_16800)	-	3229991..3230659 (+)	669	WP_017357860.1	YigZ family protein	-
AB6L51_RS16810 (AB6L51_16805)	-	3230644..3231735 (+)	1092	WP_025208065.1	LCP family protein	-
AB6L51_RS16815 (AB6L51_16810)	-	3231772..3232839 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
AB6L51_RS16820 (AB6L51_16815)	tuaH	3232974..3234221 (-)	1248	WP_407974515.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1030695 AB6L51_RS16800 WP_003213166.1 3228594..3229769(-) (degS) [Bacillus altitudinis strain BC255T1]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1030695 AB6L51_RS16800 WP_003213166.1 3228594..3229769(-) (degS) [Bacillus altitudinis strain BC255T1]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTCATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTGAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841