Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AACH48_RS04320 | Genome accession | NZ_AP027942 |
| Coordinates | 903989..904309 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain VA84 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 898989..909309
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH48_RS04300 (VAWG005_08330) | - | 899295..899972 (-) | 678 | WP_019841049.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| AACH48_RS04305 (VAWG005_08340) | - | 900328..901299 (+) | 972 | WP_005309570.1 | response regulator | - |
| AACH48_RS04310 (VAWG005_08350) | - | 901372..902769 (-) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| AACH48_RS04315 (VAWG005_08360) | galU | 902983..903894 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AACH48_RS04320 (VAWG005_08370) | comEA | 903989..904309 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| AACH48_RS04325 (VAWG005_08380) | cysQ | 904476..905246 (+) | 771 | WP_019841052.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| AACH48_RS04330 (VAWG005_08390) | - | 905325..905621 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| AACH48_RS04335 (VAWG005_08400) | - | 905646..906209 (-) | 564 | WP_005309592.1 | septation protein A | - |
| AACH48_RS04340 (VAWG005_08410) | - | 906314..907819 (-) | 1506 | WP_010636288.1 | pyridoxal-dependent decarboxylase | - |
| AACH48_RS04345 (VAWG005_08420) | - | 908037..908672 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=103047 AACH48_RS04320 WP_005309580.1 903989..904309(-) (comEA) [Aeromonas dhakensis strain VA84]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=103047 AACH48_RS04320 WP_005309580.1 903989..904309(-) (comEA) [Aeromonas dhakensis strain VA84]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |