Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   AB6M99_RS11030 Genome accession   NZ_CP163513
Coordinates   2225673..2226866 (+) Length   397 a.a.
NCBI ID   WP_121835377.1    Uniprot ID   A0A3L9DTU5
Organism   Streptococcus hillyeri strain S23-3001-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2220673..2231866
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M99_RS10995 (AB6M99_10995) - 2220766..2221638 (+) 873 WP_121835369.1 YitT family protein -
  AB6M99_RS11000 (AB6M99_11000) - 2221711..2223333 (+) 1623 WP_369350823.1 ATP-binding cassette domain-containing protein -
  AB6M99_RS11020 (AB6M99_11020) - 2224276..2224974 (-) 699 WP_121835373.1 YoaK family protein -
  AB6M99_RS11025 (AB6M99_11025) rlmH 2224994..2225473 (-) 480 WP_369350826.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB6M99_RS11030 (AB6M99_11030) htrA 2225673..2226866 (+) 1194 WP_121835377.1 S1C family serine protease Regulator
  AB6M99_RS11035 (AB6M99_11035) spo0J 2226930..2227697 (+) 768 WP_121835379.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 397 a.a.        Molecular weight: 41801.86 Da        Isoelectric Point: 4.5299

>NTDB_id=1030329 AB6M99_RS11030 WP_121835377.1 2225673..2226866(+) (htrA) [Streptococcus hillyeri strain S23-3001-2]
MKKTFSSLLKFILISCTGFIGGIVATFLMLQSNKFTSTSTNNTQTTVSKVSYKNTNDTTSAVANVQDAVVSVINYQSQQN
NSFQNVFGNSPSGELAVASEGSGVIYKKDGKFAYIVTNNHVIEGAEQIEILFADGTKVVGELVGSDTYSDLAVVKISSES
VKTVATFADSETLTVGETAIAIGSPLGSEYANSVTEGIVSSLSRTVTMKNEQGETISTNAIQTDAAINPGNSGGALINIQ
GQVIGINSSKISSTSTSLTGGSSVEGMGFAIPSNDVVKIINQLEKNGKVNRPALGITMVGLNELSTNFIFQLKLPEDVTS
GIVVASTQDNMPASGKLQKYDVITEIDEETVASSSDLQSILYGHTIGDTIKVTLYREGKKQTATIILDKTTQDLTSN

Nucleotide


Download         Length: 1194 bp        

>NTDB_id=1030329 AB6M99_RS11030 WP_121835377.1 2225673..2226866(+) (htrA) [Streptococcus hillyeri strain S23-3001-2]
ATGAAAAAAACATTTTCTTCTCTACTTAAATTTATTTTAATTAGTTGTACGGGTTTTATAGGTGGAATAGTTGCTACATT
TTTAATGCTACAAAGTAACAAGTTTACTTCTACCTCAACAAATAATACTCAGACAACTGTCAGCAAGGTGAGCTATAAAA
ATACTAATGATACCACCTCTGCAGTTGCTAACGTTCAAGATGCTGTTGTCTCTGTCATCAATTATCAAAGTCAACAAAAT
AATTCTTTTCAGAACGTCTTCGGTAACTCTCCTTCTGGAGAACTCGCTGTAGCCAGTGAAGGTTCTGGGGTTATTTACAA
AAAAGATGGTAAATTTGCTTATATCGTGACAAATAACCATGTTATTGAAGGTGCCGAGCAAATTGAAATCCTCTTTGCTG
ATGGTACAAAGGTGGTTGGTGAGTTGGTCGGAAGTGATACCTATTCTGACCTTGCGGTAGTCAAAATCTCTTCTGAGTCT
GTTAAAACTGTTGCTACATTCGCAGATTCAGAAACATTGACTGTTGGTGAAACAGCAATCGCTATCGGTAGTCCTCTTGG
ATCTGAGTATGCCAATTCTGTAACAGAAGGGATTGTGTCTAGTCTTAGCCGTACAGTTACTATGAAAAATGAGCAAGGTG
AAACCATCTCAACTAATGCTATTCAAACAGATGCTGCCATTAATCCAGGTAATTCTGGCGGAGCTCTCATCAATATTCAA
GGACAAGTTATCGGTATTAACTCAAGTAAAATCTCTTCAACGTCAACATCGTTGACAGGAGGTTCTTCGGTTGAAGGTAT
GGGATTTGCAATCCCTTCAAATGATGTTGTCAAAATTATCAATCAACTAGAGAAAAATGGAAAAGTTAACCGTCCTGCTC
TCGGTATTACGATGGTAGGTTTAAACGAATTGTCAACTAACTTTATCTTCCAATTAAAACTACCTGAAGATGTGACATCT
GGTATTGTCGTTGCAAGCACTCAAGATAACATGCCTGCATCTGGAAAACTTCAAAAATATGATGTCATTACTGAGATTGA
TGAAGAAACTGTCGCATCATCTAGTGATTTACAAAGTATTCTTTATGGTCACACTATCGGTGACACAATAAAAGTAACTC
TCTACCGTGAAGGGAAAAAGCAAACAGCTACTATTATCCTTGATAAAACAACCCAAGATTTGACTTCAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3L9DTU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

65.14

98.992

0.645

  htrA Streptococcus mitis NCTC 12261

60.957

100

0.61

  htrA Streptococcus gordonii str. Challis substr. CH1

59.799

100

0.599

  htrA Streptococcus pneumoniae TIGR4

58.543

100

0.587

  htrA Streptococcus pneumoniae D39

58.543

100

0.587

  htrA Streptococcus pneumoniae Rx1

58.543

100

0.587

  htrA Streptococcus pneumoniae R6

58.543

100

0.587


Multiple sequence alignment