Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   AB6M99_RS11035 Genome accession   NZ_CP163513
Coordinates   2226930..2227697 (+) Length   255 a.a.
NCBI ID   WP_121835379.1    Uniprot ID   -
Organism   Streptococcus hillyeri strain S23-3001-2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2221930..2232697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB6M99_RS11020 (AB6M99_11020) - 2224276..2224974 (-) 699 WP_121835373.1 YoaK family protein -
  AB6M99_RS11025 (AB6M99_11025) rlmH 2224994..2225473 (-) 480 WP_369350826.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AB6M99_RS11030 (AB6M99_11030) htrA 2225673..2226866 (+) 1194 WP_121835377.1 S1C family serine protease Regulator
  AB6M99_RS11035 (AB6M99_11035) spo0J 2226930..2227697 (+) 768 WP_121835379.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29280.71 Da        Isoelectric Point: 9.4032

>NTDB_id=1030330 AB6M99_RS11035 WP_121835379.1 2226930..2227697(+) (spo0J) [Streptococcus hillyeri strain S23-3001-2]
MTERLQVIKIEQIQKNPYQPRLSFNEDELIDLANSIKENGLIQPIIVRKSDVFGYELIAGERRLRASKIAGLEEIPAIIK
EISDDDSMKQAIIENLQRSNLNPIEEAKAYQQMIDKKQVTHEDLARYMGKSRPYISNLLRLLNLPLSLQEAVTSGKLSQG
HARVLLSLNEEKEQEFWAKEINEKQLSVRQLEAFILGKKTKKQVSKNPFITDYEKELSQQLGLPVKITASKSHKGKVTIQ
FSTEEDFHRIINSLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1030330 AB6M99_RS11035 WP_121835379.1 2226930..2227697(+) (spo0J) [Streptococcus hillyeri strain S23-3001-2]
ATGACAGAACGTTTACAGGTTATCAAAATTGAACAGATTCAAAAAAATCCCTACCAACCTAGGTTAAGTTTCAATGAAGA
TGAATTGATTGATTTGGCAAATTCTATTAAAGAGAATGGTCTCATTCAGCCAATTATTGTTCGAAAATCAGATGTTTTTG
GATATGAACTCATTGCAGGTGAGAGAAGGCTACGAGCCTCTAAAATAGCTGGCTTAGAAGAAATCCCAGCAATTATTAAG
GAAATTTCTGATGATGATAGTATGAAACAGGCTATTATTGAAAATCTTCAACGCTCTAACCTTAATCCCATTGAAGAAGC
CAAAGCCTATCAACAAATGATTGATAAAAAACAAGTCACACACGAAGATCTAGCACGTTATATGGGGAAATCACGCCCCT
ACATCAGTAATCTTCTTCGTTTACTAAATCTACCACTAAGTCTTCAAGAAGCCGTTACGTCTGGAAAACTTTCTCAAGGA
CATGCGCGTGTGCTCCTCAGCCTCAATGAAGAAAAAGAACAAGAATTTTGGGCAAAGGAAATTAATGAGAAACAGCTCAG
TGTTAGACAGCTAGAGGCTTTTATTTTAGGTAAGAAAACGAAAAAGCAAGTCTCTAAAAATCCTTTTATCACCGATTATG
AAAAAGAGCTCAGCCAACAACTAGGATTACCTGTAAAAATCACAGCCAGCAAATCACATAAAGGGAAAGTCACCATCCAA
TTTTCAACCGAAGAAGATTTCCACAGAATTATCAACAGTCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

60.392

100

0.604


Multiple sequence alignment