Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AACH59_RS04310 | Genome accession | NZ_AP027936 |
| Coordinates | 901997..902317 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain VA54 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 896997..907317
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH59_RS04290 (VAWG003_08290) | - | 897303..897980 (-) | 678 | WP_019841049.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| AACH59_RS04295 (VAWG003_08300) | - | 898336..899307 (+) | 972 | WP_005309570.1 | response regulator | - |
| AACH59_RS04300 (VAWG003_08310) | - | 899380..900777 (-) | 1398 | WP_026459194.1 | peptide MFS transporter | - |
| AACH59_RS04305 (VAWG003_08320) | galU | 900991..901902 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AACH59_RS04310 (VAWG003_08330) | comEA | 901997..902317 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| AACH59_RS04315 (VAWG003_08340) | cysQ | 902484..903254 (+) | 771 | WP_019841052.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| AACH59_RS04320 (VAWG003_08350) | - | 903333..903629 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| AACH59_RS04325 (VAWG003_08360) | - | 903654..904217 (-) | 564 | WP_005309592.1 | septation protein A | - |
| AACH59_RS04330 (VAWG003_08370) | - | 904322..905827 (-) | 1506 | WP_010636288.1 | pyridoxal-dependent decarboxylase | - |
| AACH59_RS04335 (VAWG003_08380) | - | 906045..906680 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=102933 AACH59_RS04310 WP_005309580.1 901997..902317(-) (comEA) [Aeromonas dhakensis strain VA54]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=102933 AACH59_RS04310 WP_005309580.1 901997..902317(-) (comEA) [Aeromonas dhakensis strain VA54]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCAAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |