Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | AACH72_RS19100 | Genome accession | NZ_AP027931 |
| Coordinates | 4128463..4128783 (-) | Length | 106 a.a. |
| NCBI ID | WP_005309580.1 | Uniprot ID | K1K148 |
| Organism | Aeromonas dhakensis strain VA6 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4123463..4133783
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH72_RS19080 (VAWG001_36910) | - | 4123770..4124447 (-) | 678 | WP_005309566.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| AACH72_RS19085 (VAWG001_36920) | - | 4124802..4125773 (+) | 972 | WP_005309570.1 | response regulator | - |
| AACH72_RS19090 (VAWG001_36930) | - | 4125846..4127243 (-) | 1398 | WP_011707249.1 | peptide MFS transporter | - |
| AACH72_RS19095 (VAWG001_36940) | galU | 4127457..4128368 (-) | 912 | WP_005309577.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| AACH72_RS19100 (VAWG001_36950) | comEA | 4128463..4128783 (-) | 321 | WP_005309580.1 | ComEA family DNA-binding protein | Machinery gene |
| AACH72_RS19105 (VAWG001_36960) | cysQ | 4128950..4129720 (+) | 771 | WP_213344595.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| AACH72_RS19110 (VAWG001_36970) | - | 4129799..4130095 (-) | 297 | WP_005309589.1 | YciI family protein | - |
| AACH72_RS19115 (VAWG001_36980) | - | 4130120..4130683 (-) | 564 | WP_005309592.1 | septation protein A | - |
| AACH72_RS19120 (VAWG001_36990) | - | 4130788..4132293 (-) | 1506 | WP_213344596.1 | pyridoxal-dependent decarboxylase | - |
| AACH72_RS19125 (VAWG001_37000) | - | 4132512..4133147 (+) | 636 | WP_010636289.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11183.03 Da Isoelectric Point: 9.5773
>NTDB_id=102899 AACH72_RS19100 WP_005309580.1 4128463..4128783(-) (comEA) [Aeromonas dhakensis strain VA6]
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
MNYKTLTATLLLSCLPLLSQPLLAADKPAAKPATTVATAKESGKVNLNTASINELTALKGIGEKKAQAIVDYREKQGKFT
TVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=102899 AACH72_RS19100 WP_005309580.1 4128463..4128783(-) (comEA) [Aeromonas dhakensis strain VA6]
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCCAATCGGGACATGATCATCGTCAAGTA
A
ATGAACTACAAGACCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCGCTGCTGAGCCAGCCCCTGCTGGCCGCCGACAA
GCCCGCCGCCAAACCGGCCACCACGGTTGCCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACCGCCAGTATCAACG
AGTTGACCGCGCTCAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGATTATCGCGAGAAACAGGGCAAGTTCACC
ACTGTTGACCAGCTTGCCGATGTCAGCGGTATCGGCCCCGCCACGCTGGAAGCCAATCGGGACATGATCATCGTCAAGTA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
53.636 |
100 |
0.557 |
| comEA | Vibrio cholerae strain A1552 |
53.636 |
100 |
0.557 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
47.423 |
91.509 |
0.434 |
| comEA | Legionella pneumophila strain ERS1305867 |
41.837 |
92.453 |
0.387 |
| comEA | Legionella pneumophila str. Paris |
41.837 |
92.453 |
0.387 |
| comEA/celA/cilE | Streptococcus mitis NCTC 12261 |
52.632 |
71.698 |
0.377 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
63.492 |
59.434 |
0.377 |