Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AB3U43_RS29650 | Genome accession | NZ_CP162629 |
| Coordinates | 4901740..4902321 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus cereus strain L6 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4896740..4907321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB3U43_RS29615 (AB3U43_29615) | - | 4897736..4897942 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| AB3U43_RS29620 (AB3U43_29620) | - | 4898036..4898521 (+) | 486 | WP_001228546.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| AB3U43_RS29625 (AB3U43_29625) | spoVAC | 4898551..4899027 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| AB3U43_RS29630 (AB3U43_29630) | spoVAD | 4899028..4900044 (+) | 1017 | WP_000938972.1 | stage V sporulation protein AD | - |
| AB3U43_RS29635 (AB3U43_29635) | spoVAE | 4900041..4900391 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| AB3U43_RS29640 (AB3U43_29640) | - | 4900403..4900609 (+) | 207 | WP_000215909.1 | DUF1657 domain-containing protein | - |
| AB3U43_RS29645 (AB3U43_29645) | - | 4900630..4901499 (+) | 870 | WP_016118878.1 | DUF421 domain-containing protein | - |
| AB3U43_RS29650 (AB3U43_29650) | clpP | 4901740..4902321 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AB3U43_RS29655 (AB3U43_29655) | - | 4902630..4902878 (-) | 249 | WP_000250307.1 | HPr family phosphocarrier protein | - |
| AB3U43_RS29660 (AB3U43_29660) | whiA | 4902902..4903852 (-) | 951 | WP_000006560.1 | DNA-binding protein WhiA | - |
| AB3U43_RS29665 (AB3U43_29665) | yvcK | 4903941..4904894 (-) | 954 | WP_000712186.1 | YvcK family protein | - |
| AB3U43_RS29670 (AB3U43_29670) | rapZ | 4904898..4905779 (-) | 882 | WP_000138459.1 | RNase adapter RapZ | - |
| AB3U43_RS29675 (AB3U43_29675) | - | 4905800..4906258 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
| AB3U43_RS29680 (AB3U43_29680) | - | 4906477..4907283 (-) | 807 | WP_000455196.1 | DUF368 domain-containing protein | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=1027640 AB3U43_RS29650 WP_001049162.1 4901740..4902321(+) (clpP) [Bacillus cereus strain L6]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=1027640 AB3U43_RS29650 WP_001049162.1 4901740..4902321(+) (clpP) [Bacillus cereus strain L6]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAGCCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGAGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCGGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTATTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAGCCACAAGTATCAACAATCTGTATCGGTATGGCAGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGAGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCGGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |