Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   BJR96_RS03695 Genome accession   NZ_LT545678
Coordinates   661448..661627 (+) Length   59 a.a.
NCBI ID   WP_000965647.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate SA111     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 656448..666627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJR96_RS03655 (SA111_00721) - 656568..656957 (+) 390 WP_070002982.1 DUF1366 domain-containing protein -
  BJR96_RS12420 - 656980..657108 (+) 129 WP_000973385.1 hypothetical protein -
  BJR96_RS03660 (SA111_00723) - 657117..657419 (+) 303 WP_001018078.1 hypothetical protein -
  BJR96_RS03665 (SA111_00724) - 657412..657639 (+) 228 WP_000609114.1 phage holin -
  BJR96_RS03670 (SA111_00726) - 657767..659110 (+) 1344 WP_069987850.1 GH25 family lysozyme -
  BJR96_RS03675 (SA111_00727) - 659476..659988 (+) 513 WP_000634506.1 PBECR4 domain-containing protein -
  BJR96_RS11855 (SA111_00728) - 660148..660347 (+) 200 Protein_648 CsbD family protein -
  BJR96_RS03685 (SA111_00729) - 660428..660679 (-) 252 WP_000455663.1 hypothetical protein -
  BJR96_RS12120 (SA111_00730) - 660820..660966 (-) 147 WP_171898157.1 hypothetical protein -
  BJR96_RS03690 (SA111_00731) - 661116..661325 (+) 210 WP_000424774.1 helix-turn-helix domain-containing protein -
  BJR96_RS03695 (SA111_00732) prx 661448..661627 (+) 180 WP_000965647.1 hypothetical protein Regulator
  BJR96_RS12430 - 661984..662307 (-) 324 WP_233263921.1 tyrosine-type recombinase/integrase -
  BJR96_RS03700 (SA111_00733) - 662343..662609 (-) 267 WP_001872365.1 hypothetical protein -
  BJR96_RS12245 - 662615..663992 (+) 1378 Protein_655 IS3 family transposase -
  BJR96_RS11465 - 664165..664326 (-) 162 WP_000508795.1 TM2 domain-containing protein -
  BJR96_RS03720 (SA111_00737) - 664534..665478 (+) 945 WP_000222594.1 IS30 family transposase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 7017.06 Da        Isoelectric Point: 4.4621

>NTDB_id=1027478 BJR96_RS03695 WP_000965647.1 661448..661627(+) (prx) [Streptococcus agalactiae isolate SA111]
MLYIDEFKEAIDRGYIMGSTVAIVRKNGKIFDYVLPHEEVREEEVVTVERVEDVMRELR

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1027478 BJR96_RS03695 WP_000965647.1 661448..661627(+) (prx) [Streptococcus agalactiae isolate SA111]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAGAGGATATATTATGGGAAGCACAGTTGCGATCGTACGAAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAGAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGAGGTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

74.138

98.305

0.729
  prx Streptococcus pyogenes MGAS8232

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS315

70.69

98.305

0.695
  prx Streptococcus pyogenes MGAS315

65.517

98.305

0.644
  prx Streptococcus pyogenes MGAS315

86.047

72.881

0.627
  prx Streptococcus pyogenes MGAS315

74.419

72.881

0.542
  prx Streptococcus pyogenes MGAS315

76.19

71.186

0.542