Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   BJR96_RS03225 Genome accession   NZ_LT545678
Coordinates   579497..579676 (+) Length   59 a.a.
NCBI ID   WP_069986155.1    Uniprot ID   -
Organism   Streptococcus agalactiae isolate SA111     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 574497..584676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJR96_RS03205 (SA111_00625) - 576110..576499 (+) 390 WP_070002982.1 DUF1366 domain-containing protein -
  BJR96_RS12405 - 576522..576650 (+) 129 WP_000973385.1 hypothetical protein -
  BJR96_RS03210 (SA111_00627) - 576659..576961 (+) 303 WP_001018078.1 hypothetical protein -
  BJR96_RS03215 (SA111_00628) - 576954..577181 (+) 228 WP_000609114.1 phage holin -
  BJR96_RS03220 (SA111_00630) - 577309..578652 (+) 1344 WP_069987850.1 GH25 family lysozyme -
  BJR96_RS11435 (SA111_00631) - 578909..579079 (-) 171 WP_000356856.1 hypothetical protein -
  BJR96_RS12410 - 579215..579340 (-) 126 WP_017285425.1 hypothetical protein -
  BJR96_RS03225 (SA111_00632) prx 579497..579676 (+) 180 WP_069986155.1 Paratox Regulator
  BJR96_RS03230 (SA111_00633) - 580082..580279 (+) 198 WP_001290370.1 hypothetical protein -
  BJR96_RS03240 (SA111_00635) - 580360..581705 (+) 1346 WP_371316017.1 IS3-like element IS861 family transposase -
  BJR96_RS03245 (SA111_00636) - 581758..582690 (-) 933 WP_000254068.1 dihydroorotate oxidase -
  BJR96_RS03250 (SA111_00637) - 582878..584113 (-) 1236 WP_001185393.1 aminoacyltransferase -

Sequence


Protein


Download         Length: 59 a.a.        Molecular weight: 6910.83 Da        Isoelectric Point: 4.1317

>NTDB_id=1027476 BJR96_RS03225 WP_069986155.1 579497..579676(+) (prx) [Streptococcus agalactiae isolate SA111]
MLYIDELQEAIDKGYISGNTVAIVRKNGKIFDYVLPHEEVREEEVVTVERVEDVMRELE

Nucleotide


Download         Length: 180 bp        

>NTDB_id=1027476 BJR96_RS03225 WP_069986155.1 579497..579676(+) (prx) [Streptococcus agalactiae isolate SA111]
ATGTTATATATAGATGAGCTACAAGAAGCGATTGATAAAGGCTATATTTCAGGGAACACAGTAGCGATAGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAGAAGTGAGAGAAGAAGAGGTTGTGACAGTTGAGAGAGTGGAAGACG
TTATGAGAGAATTGGAGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

69.492

100

0.695

  prx Streptococcus pyogenes MGAS315

66.102

100

0.661

  prx Streptococcus pyogenes MGAS8232

67.241

98.305

0.661

  prx Streptococcus pyogenes MGAS315

83.721

72.881

0.61

  prx Streptococcus pyogenes MGAS315

60.345

98.305

0.593

  prx Streptococcus pyogenes MGAS315

71.429

71.186

0.508

  prx Streptococcus pyogenes MGAS315

69.767

72.881

0.508


Multiple sequence alignment