Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQN29_RS04355 Genome accession   NZ_LS483437
Coordinates   805259..805447 (+) Length   62 a.a.
NCBI ID   WP_011528571.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13751     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 800259..810447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN29_RS04320 (NCTC13751_00865) - 800394..801158 (+) 765 WP_011054797.1 CHAP domain-containing protein -
  DQN29_RS04325 (NCTC13751_00866) - 801170..801772 (+) 603 WP_011054796.1 hypothetical protein -
  DQN29_RS04330 (NCTC13751_00867) - 801783..802556 (+) 774 WP_011528569.1 hypothetical protein -
  DQN29_RS04335 (NCTC13751_00868) - 802566..802787 (+) 222 WP_009880241.1 hypothetical protein -
  DQN29_RS04340 (NCTC13751_00869) - 802787..803446 (+) 660 WP_011528570.1 hypothetical protein -
  DQN29_RS04345 (NCTC13751_00870) - 803515..803949 (-) 435 WP_011017966.1 hypothetical protein -
  DQN29_RS04350 (NCTC13751_00871) sda3 804221..805021 (-) 801 WP_011285611.1 streptodornase Sda3 -
  DQN29_RS04355 (NCTC13751_00872) prx 805259..805447 (+) 189 WP_011528571.1 hypothetical protein Regulator
  DQN29_RS04360 (NCTC13751_00873) mutX 805855..806331 (+) 477 WP_002984880.1 NUDIX hydrolase Machinery gene
  DQN29_RS04365 (NCTC13751_00874) - 806389..807570 (+) 1182 WP_038432925.1 AI-2E family transporter -
  DQN29_RS04370 (NCTC13751_00875) - 807560..808807 (+) 1248 WP_032460151.1 tetratricopeptide repeat protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7224.11 Da        Isoelectric Point: 4.0606

>NTDB_id=1024813 DQN29_RS04355 WP_011528571.1 805259..805447(+) (prx) [Streptococcus pyogenes strain NCTC13751]
MLTYDEFKQAIDREYITGDTVMIVRKNGQIFDYVLPHEEVRNGEVVTIERISDVMAELSESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1024813 DQN29_RS04355 WP_011528571.1 805259..805447(+) (prx) [Streptococcus pyogenes strain NCTC13751]
ATGCTAACATATGACGAGTTTAAGCAAGCAATCGACCGTGAATATATCACAGGAGACACAGTTATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAAGAAGTGAGAAATGGGGAAGTTGTGACAATCGAGCGGATATCAGATG
TTATGGCAGAACTTTCTGAGTCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

76.667

96.774

0.742
  prx Streptococcus pyogenes MGAS315

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS8232

76.271

95.161

0.726
  prx Streptococcus pyogenes MGAS315

71.667

96.774

0.694
  prx Streptococcus pyogenes MGAS315

90.698

69.355

0.629
  prx Streptococcus pyogenes MGAS315

85.366

66.129

0.565
  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516