Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQN31_RS03585 Genome accession   NZ_LS483421
Coordinates   675210..675392 (+) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC10877     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 670210..680392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN31_RS03560 (NCTC10877_00701) - 671351..671875 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  DQN31_RS03565 (NCTC10877_00702) - 671863..672729 (+) 867 WP_011054729.1 DUF334 domain-containing protein -
  DQN31_RS03570 (NCTC10877_00703) spek 673034..673813 (+) 780 WP_011054728.1 streptococcal pyrogenic exotoxin SpeK -
  DQN31_RS03575 (NCTC10877_00704) - 674289..674864 (+) 576 WP_011054727.1 hypothetical protein -
  DQN31_RS03585 (NCTC10877_00706) prx 675210..675392 (+) 183 WP_011017964.1 hypothetical protein Regulator
  DQN31_RS03590 (NCTC10877_00707) - 675922..677784 (+) 1863 WP_014407683.1 heavy metal translocating P-type ATPase -
  DQN31_RS03595 (NCTC10877_00708) - 678084..679019 (-) 936 WP_014407682.1 dihydroorotate oxidase -
  DQN31_RS03600 (NCTC10877_00709) - 679258..679953 (+) 696 WP_002983928.1 phosphoglycerate mutase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=1024214 DQN31_RS03585 WP_011017964.1 675210..675392(+) (prx) [Streptococcus pyogenes strain NCTC10877]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1024214 DQN31_RS03585 WP_011017964.1 675210..675392(+) (prx) [Streptococcus pyogenes strain NCTC10877]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment