Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN75_RS07660 Genome accession   NZ_LS483420
Coordinates   1506273..1506824 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13739     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1501273..1511824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN75_RS07625 (NCTC13739_01512) - 1501277..1502020 (-) 744 WP_014407307.1 class I SAM-dependent DNA methyltransferase -
  DQN75_RS07630 (NCTC13739_01513) rsfS 1502068..1502421 (-) 354 WP_015055915.1 ribosome silencing factor -
  DQN75_RS07635 (NCTC13739_01514) yqeK 1502445..1503038 (-) 594 WP_002985989.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  DQN75_RS07640 (NCTC13739_01515) - 1503035..1503667 (-) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -
  DQN75_RS07645 (NCTC13739_01516) yhbY 1503736..1504044 (-) 309 WP_111685182.1 ribosome assembly RNA-binding protein YhbY -
  DQN75_RS07650 (NCTC13739_01517) yqeH 1504069..1505187 (-) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  DQN75_RS07655 (NCTC13739_01518) - 1505187..1505714 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN75_RS07660 (NCTC13739_01519) comX/sigX/comX2/sigX2 1506273..1506824 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1024152 DQN75_RS07660 WP_010921894.1 1506273..1506824(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13739]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1024152 DQN75_RS07660 WP_010921894.1 1506273..1506824(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13739]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.