Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   DQN44_RS08600 Genome accession   NZ_LS483414
Coordinates   1650472..1651023 (-) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC13736     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1645472..1656023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQN44_RS08570 (NCTC13736_01702) - 1645908..1646540 (-) 633 WP_002991091.1 nicotinate-nucleotide adenylyltransferase -
  DQN44_RS08575 (NCTC13736_01703) yhbY 1646609..1646917 (-) 309 WP_030127134.1 ribosome assembly RNA-binding protein YhbY -
  DQN44_RS08580 (NCTC13736_01704) yqeH 1646942..1648060 (-) 1119 WP_011184178.1 ribosome biogenesis GTPase YqeH -
  DQN44_RS08585 (NCTC13736_01705) - 1648060..1648587 (-) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  DQN44_RS08595 (NCTC13736_01706) - 1648750..1649883 (-) 1134 WP_076636818.1 ISAs1-like element IS1548 family transposase -
  DQN44_RS08600 (NCTC13736_01707) comX/sigX/comX2/sigX2 1650472..1651023 (-) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=1023751 DQN44_RS08600 WP_010921894.1 1650472..1651023(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13736]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=1023751 DQN44_RS08600 WP_010921894.1 1650472..1651023(-) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain NCTC13736]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTCCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.