Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   STAB902_RS04905 Genome accession   NZ_CP007041
Coordinates   918918..919100 (+) Length   60 a.a.
NCBI ID   WP_029714017.1    Uniprot ID   -
Organism   Streptococcus pyogenes STAB902     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 913918..924100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STAB902_RS04860 (STAB902_05110) - 914335..914952 (+) 618 Protein_930 DUF1366 domain-containing protein -
  STAB902_RS04865 (STAB902_05115) - 914962..915237 (+) 276 WP_002987582.1 hypothetical protein -
  STAB902_RS04870 (STAB902_05120) - 915234..915461 (+) 228 WP_003058873.1 phage holin -
  STAB902_RS04880 (STAB902_05130) - 915577..916785 (+) 1209 WP_011054445.1 glucosaminidase domain-containing protein -
  STAB902_RS04885 (STAB902_05135) - 916901..917257 (-) 357 WP_011054446.1 hypothetical protein -
  STAB902_RS04890 (STAB902_05140) - 917315..917554 (-) 240 WP_011054447.1 hypothetical protein -
  STAB902_RS04895 (STAB902_05145) - 917818..918069 (-) 252 WP_011054448.1 hypothetical protein -
  STAB902_RS10250 - 918210..918356 (-) 147 WP_011054449.1 hypothetical protein -
  STAB902_RS04900 (STAB902_05155) - 918510..918719 (+) 210 WP_011054450.1 helix-turn-helix domain-containing protein -
  STAB902_RS04905 (STAB902_05160) prx 918918..919100 (+) 183 WP_029714017.1 hypothetical protein Regulator
  STAB902_RS10255 - 919323..919729 (+) 407 Protein_940 nucleoside-diphosphate kinase -
  STAB902_RS04915 (STAB902_05175) lepA 919853..921685 (+) 1833 WP_011054451.1 translation elongation factor 4 -
  STAB902_RS09855 slc2 921872..922627 (+) 756 WP_195757296.1 LPXTG-anchored collagen-like adhesin Scl2/SclB -
  STAB902_RS04925 (STAB902_05185) msrB 922780..923217 (+) 438 WP_011054453.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 6890.90 Da        Isoelectric Point: 4.1947

>NTDB_id=102284 STAB902_RS04905 WP_029714017.1 918918..919100(+) (prx) [Streptococcus pyogenes STAB902]
MLTYDEFKQAIDNGYITADTVAIVRKNGLIFDYVLPHESVRSCEIVIEERVAEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=102284 STAB902_RS04905 WP_029714017.1 918918..919100(+) (prx) [Streptococcus pyogenes STAB902]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACACAGTAGCGATCGTGCGTAAAAA
CGGATTGATATTTGATTATGTGTTGCCGCACGAGTCTGTGAGATCGTGTGAGATTGTGATCGAGGAGAGGGTGGCGGAGG
TGATGGTGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

80

100

0.8

  prx Streptococcus pyogenes MGAS315

75

100

0.75

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

73.333

100

0.733

  prx Streptococcus pyogenes MGAS315

80.952

70

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55


Multiple sequence alignment