Detailed information NTG1022580

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: AB1395_RS02415
• Genome accession: NZ_CP161815
• Coordinates: 468286..468876 (+)
• Length: 196 a.a.
• NCBI ID: WP_104967377.1
• Uniprot ID: -
• Organism: Streptococcus pluranimalium strain SS-15
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 463286..473876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1395_RS02400 (AB1395_02400)	-	465032..466126 (+)	1095	WP_367783725.1	cystathionine gamma-synthase	-
AB1395_RS02405 (AB1395_02405)	-	466136..467302 (+)	1167	WP_218654087.1	MalY/PatB family protein	-
AB1395_RS02410 (AB1395_02410)	upp	467394..468023 (+)	630	WP_104967376.1	uracil phosphoribosyltransferase	-
AB1395_RS02415 (AB1395_02415)	clpP	468286..468876 (+)	591	WP_104967377.1	ATP-dependent Clp protease proteolytic subunit	Regulator
AB1395_RS02420 (AB1395_02420)	-	468979..469236 (+)	258	WP_104968804.1	DUF2129 domain-containing protein	-
AB1395_RS02425 (AB1395_02425)	-	469523..470698 (+)	1176	WP_316606638.1	ABC transporter substrate-binding protein	-
AB1395_RS02430 (AB1395_02430)	-	470834..471703 (+)	870	WP_104967380.1	branched-chain amino acid ABC transporter permease	-
AB1395_RS02435 (AB1395_02435)	-	471708..472661 (+)	954	WP_367783729.1	branched-chain amino acid ABC transporter permease	-
AB1395_RS02440 (AB1395_02440)	-	472661..473425 (+)	765	WP_367783731.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21635.83 Da
• Isoelectric Point: 4.6424

>NTDB_id=1022580 AB1395_RS02415 WP_104967377.1 468286..468876(+) (clpP) [Streptococcus pluranimalium strain SS-15]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMMHQPMGGTGGGTQQTDMAIAAEHLLKTRHKLEKILSDNSGQ
TMEKIHIDAERDRWMDAEETLEYGFIDAIMDNNELK

Nucleotide

• Length: 591 bp

>NTDB_id=1022580 AB1395_RS02415 WP_104967377.1 468286..468876(+) (clpP) [Streptococcus pluranimalium strain SS-15]
ATGATTCCAGTAGTTATTGAACAAACATCACGTGGCGAACGCTCTTACGATATTTATTCACGTCTCTTAAAAGACCGTAT
TATCATGTTGACTGGTCCAGTTGAAGACAACATGGCTAACTCAGTGATTGCCCAGTTGCTCTTCTTGGATGCACAAGATC
CAACCAAAGATATTTACCTTTACGTTAACACACCAGGGGGTTCGGTTTCAGCTGGCTTAGCAATTGTTGATACCATGAAC
TTCATAAAAGCTGATGTCCAAACTATTGTTATGGGAATGGCAGCTTCAATGGGAACTATTATCGCTTCATCAGGTGCTAA
AGGCAAACGTTTTATGTTACCAAATGCAGAATACATGATGCACCAACCAATGGGCGGTACTGGTGGAGGTACCCAACAAA
CGGATATGGCTATTGCGGCTGAACACCTTTTGAAAACACGTCACAAATTAGAAAAAATTCTTTCTGATAACTCAGGACAA
ACTATGGAGAAAATCCATATTGATGCTGAACGTGATCGTTGGATGGATGCTGAGGAAACCCTTGAGTATGGTTTCATTGA
CGCTATCATGGATAATAATGAGTTGAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	91.795	99.49	0.913
clpP	Streptococcus pneumoniae D39	91.795	99.49	0.913
clpP	Streptococcus pneumoniae R6	91.795	99.49	0.913
clpP	Streptococcus pneumoniae TIGR4	91.795	99.49	0.913
clpP	Streptococcus pyogenes MGAS315	90.816	100	0.908
clpP	Streptococcus pyogenes JRS4	90.816	100	0.908
clpP	Streptococcus thermophilus LMG 18311	89.796	100	0.898
clpP	Streptococcus thermophilus LMD-9	89.796	100	0.898
clpP	Streptococcus mutans UA159	89.286	100	0.893
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	84.694	100	0.847
clpP	Lactococcus lactis subsp. cremoris KW2	84.184	100	0.842
clpP	Bacillus subtilis subsp. subtilis str. 168	58.163	100	0.582
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	56.995	98.469	0.561