Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | AB0R67_RS25620 | Genome accession | NZ_CP160237 |
| Coordinates | 4997263..4997844 (+) | Length | 193 a.a. |
| NCBI ID | WP_001049162.1 | Uniprot ID | A0A9W5QPC2 |
| Organism | Bacillus thuringiensis strain JJ1216 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4992263..5002844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB0R67_RS25585 (AB0R67_25590) | - | 4993259..4993465 (+) | 207 | WP_000216166.1 | DUF1657 domain-containing protein | - |
| AB0R67_RS25590 (AB0R67_25595) | - | 4993559..4994044 (+) | 486 | WP_001228545.1 | YhcN/YlaJ family sporulation lipoprotein | - |
| AB0R67_RS25595 (AB0R67_25600) | spoVAC | 4994074..4994550 (+) | 477 | WP_000095399.1 | stage V sporulation protein AC | - |
| AB0R67_RS25600 (AB0R67_25605) | spoVAD | 4994551..4995567 (+) | 1017 | WP_000938972.1 | stage V sporulation protein AD | - |
| AB0R67_RS25605 (AB0R67_25610) | spoVAE | 4995564..4995914 (+) | 351 | WP_000575919.1 | stage V sporulation protein AE | - |
| AB0R67_RS25610 (AB0R67_25615) | - | 4995926..4996132 (+) | 207 | WP_000215906.1 | DUF1657 domain-containing protein | - |
| AB0R67_RS25615 (AB0R67_25620) | - | 4996153..4997022 (+) | 870 | WP_053563375.1 | DUF421 domain-containing protein | - |
| AB0R67_RS25620 (AB0R67_25625) | clpP | 4997263..4997844 (+) | 582 | WP_001049162.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| AB0R67_RS25625 (AB0R67_25630) | - | 4998246..4998494 (-) | 249 | WP_075717077.1 | HPr family phosphocarrier protein | - |
| AB0R67_RS25630 (AB0R67_25635) | whiA | 4998518..4999468 (-) | 951 | WP_000006566.1 | DNA-binding protein WhiA | - |
| AB0R67_RS25635 (AB0R67_25640) | - | 4999557..5000510 (-) | 954 | WP_000712187.1 | YvcK family protein | - |
| AB0R67_RS25640 (AB0R67_25645) | rapZ | 5000514..5001395 (-) | 882 | WP_000138459.1 | RNase adapter RapZ | - |
| AB0R67_RS25645 (AB0R67_25650) | - | 5001416..5001874 (-) | 459 | WP_001190080.1 | 8-oxo-dGTP diphosphatase | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21419.67 Da Isoelectric Point: 5.0423
>NTDB_id=1020399 AB0R67_RS25620 WP_001049162.1 4997263..4997844(+) (clpP) [Bacillus thuringiensis strain JJ1216]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIHIYINSPGGSITAGMAIYDT
MQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQ
PLEVLQRDTDRDNFMTAEKALEYGLIDKIFTNR
Nucleotide
Download Length: 582 bp
>NTDB_id=1020399 AB0R67_RS25620 WP_001049162.1 4997263..4997844(+) (clpP) [Bacillus thuringiensis strain JJ1216]
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTACTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCGGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
ATGAATTTAATTCCTACAGTAATTGAACAAACAAATCGTGGAGAACGCGCTTACGATATTTACTCTCGACTACTAAAAGA
CCGCATCATTATGCTTGGTAGTGCAATTGATGACAACGTAGCTAACTCAATCGTTTCCCAGCTTTTATTCTTGGAATCTC
AAGATCCAGAAAAAGATATTCACATCTACATCAACAGCCCTGGTGGTTCTATCACAGCAGGTATGGCAATCTATGATACA
ATGCAGTTTATTAAACCACAAGTATCAACAATCTGTATCGGTATGGCTGCATCTATGGGTGCATTCTTACTTGCAGCAGG
TGAAAAAGGAAAACGTTATGCACTTCCAAACAGTGAAGTAATGATTCACCAACCACTTGGTGGAGCACAAGGTCAAGCGA
CTGAAATCGAAATCGCTGCAAAACGTATCCTATTCTTACGTGAAAAACTAAACCAAATTCTTGCTGACCGCACTGGTCAA
CCACTTGAAGTACTACAACGCGACACAGACCGCGACAACTTCATGACAGCGGAAAAAGCTTTAGAATACGGTTTAATCGA
TAAGATCTTTACAAATCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
90.104 |
99.482 |
0.896 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.021 |
97.409 |
0.653 |
| clpP | Streptococcus thermophilus LMG 18311 |
60.417 |
99.482 |
0.601 |
| clpP | Streptococcus thermophilus LMD-9 |
60.417 |
99.482 |
0.601 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
58.854 |
99.482 |
0.585 |
| clpP | Streptococcus pneumoniae D39 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae Rx1 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae R6 |
57.292 |
99.482 |
0.57 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.292 |
99.482 |
0.57 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
56.771 |
99.482 |
0.565 |
| clpP | Streptococcus pyogenes JRS4 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus pyogenes MGAS315 |
55.729 |
99.482 |
0.554 |
| clpP | Streptococcus mutans UA159 |
55.44 |
100 |
0.554 |