Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQM51_RS08145 Genome accession   NZ_LS483356
Coordinates   1545251..1545433 (-) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8230     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1540251..1550433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM51_RS08130 (NCTC8230_01614) - 1540511..1540972 (-) 462 WP_002988493.1 deoxycytidylate deaminase -
  DQM51_RS08135 (NCTC8230_01615) - 1541007..1542080 (-) 1074 WP_111713354.1 M24 family metallopeptidase -
  DQM51_RS08140 (NCTC8230_01616) uvrA 1542196..1545024 (-) 2829 WP_111713355.1 excinuclease ABC subunit UvrA Machinery gene
  DQM51_RS08145 (NCTC8230_01617) prx 1545251..1545433 (-) 183 WP_011184907.1 hypothetical protein Regulator
  DQM51_RS08150 (NCTC8230_01618) sda3 1545671..1546471 (+) 801 WP_172452791.1 streptodornase Sda3 -
  DQM51_RS08155 (NCTC8230_01619) - 1546741..1547175 (+) 435 WP_011017966.1 hypothetical protein -
  DQM51_RS08160 (NCTC8230_01620) - 1547245..1548453 (-) 1209 WP_111713357.1 glucosaminidase domain-containing protein -
  DQM51_RS08165 (NCTC8230_01622) - 1548569..1548796 (-) 228 WP_011054444.1 phage holin -
  DQM51_RS08170 (NCTC8230_01623) - 1548793..1549065 (-) 273 WP_011017397.1 hypothetical protein -
  DQM51_RS08175 (NCTC8230_01624) - 1549077..1549709 (-) 633 WP_011054443.1 hypothetical protein -
  DQM51_RS08180 (NCTC8230_01625) - 1549712..1550140 (-) 429 WP_002988448.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=1020002 DQM51_RS08145 WP_011184907.1 1545251..1545433(-) (prx) [Streptococcus pyogenes strain NCTC8230]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1020002 DQM51_RS08145 WP_011184907.1 1545251..1545433(-) (prx) [Streptococcus pyogenes strain NCTC8230]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55