Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   DQM51_RS05555 Genome accession   NZ_LS483356
Coordinates   1052536..1052724 (-) Length   62 a.a.
NCBI ID   WP_011054546.1    Uniprot ID   A0A0H2UUN1
Organism   Streptococcus pyogenes strain NCTC8230     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1047536..1057724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM51_RS05530 (NCTC8230_01102) - 1049336..1049707 (+) 372 WP_002989617.1 GntR family transcriptional regulator -
  DQM51_RS05535 (NCTC8230_01103) - 1049707..1050405 (+) 699 WP_002984437.1 ABC transporter ATP-binding protein -
  DQM51_RS05540 (NCTC8230_01104) - 1050415..1051200 (+) 786 WP_002984433.1 hypothetical protein -
  DQM51_RS05545 (NCTC8230_01105) - 1051331..1051945 (-) 615 WP_002989607.1 TVP38/TMEM64 family protein -
  DQM51_RS05555 (NCTC8230_01107) prx 1052536..1052724 (-) 189 WP_011054546.1 hypothetical protein Regulator
  DQM51_RS05560 (NCTC8230_01108) spel 1052839..1053627 (-) 789 WP_021340779.1 streptococcal pyrogenic exotoxin SpeL -
  DQM51_RS05565 (NCTC8230_01109) spem 1053909..1054622 (-) 714 WP_014635497.1 streptococcal pyrogenic exotoxin SpeM -
  DQM51_RS05570 (NCTC8230_01110) - 1054926..1055792 (-) 867 WP_011054729.1 DUF334 domain-containing protein -
  DQM51_RS05575 (NCTC8230_01111) - 1055780..1056304 (-) 525 WP_011017840.1 Panacea domain-containing protein -
  DQM51_RS05580 (NCTC8230_01112) - 1056444..1057640 (-) 1197 WP_111713277.1 glucosaminidase domain-containing protein -

Sequence


Protein


Download         Length: 62 a.a.        Molecular weight: 7226.17 Da        Isoelectric Point: 3.9947

>NTDB_id=1019975 DQM51_RS05555 WP_011054546.1 1052536..1052724(-) (prx) [Streptococcus pyogenes strain NCTC8230]
MLTYDEFKQAIDDGYIVGDTVMIVRKNGQIFDYVLPHEEARNGEVVTEEKVEEVMVELDYIK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1019975 DQM51_RS05555 WP_011054546.1 1052536..1052724(-) (prx) [Streptococcus pyogenes strain NCTC8230]
ATGCTAACATACGACGAATTTAAGCAAGCTATTGATGACGGATATATCGTAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGCATGAGGAAGCGAGAAATGGAGAAGTTGTGACAGAGGAGAAGGTGGAAGAAG
TGATGGTGGAATTAGACTATATCAAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2UUN1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1

  prx Streptococcus pyogenes MGAS315

84.746

95.161

0.806

  prx Streptococcus pyogenes MGAS8232

84.483

93.548

0.79

  prx Streptococcus pyogenes MGAS315

82.759

93.548

0.774

  prx Streptococcus pyogenes MGAS315

77.966

95.161

0.742

  prx Streptococcus pyogenes MGAS315

87.805

66.129

0.581

  prx Streptococcus pyogenes MGAS315

76.19

67.742

0.516


Multiple sequence alignment