Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL02_RS06950 Genome accession   NZ_LS483355
Coordinates   1381006..1381188 (-) Length   60 a.a.
NCBI ID   WP_047149504.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12067     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1376006..1386188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL02_RS06935 (NCTC12067_01380) - 1376267..1376728 (-) 462 WP_002988493.1 deoxycytidylate deaminase -
  DQL02_RS06940 (NCTC12067_01381) - 1376763..1377836 (-) 1074 WP_063510274.1 M24 family metallopeptidase -
  DQL02_RS06945 (NCTC12067_01382) uvrA 1377951..1380779 (-) 2829 WP_011054967.1 excinuclease ABC subunit UvrA Machinery gene
  DQL02_RS06950 (NCTC12067_01383) prx 1381006..1381188 (-) 183 WP_047149504.1 hypothetical protein Regulator
  DQL02_RS06955 (NCTC12067_01384) mf2 1381428..1382186 (+) 759 WP_011184727.1 DNase Mf2 -
  DQL02_RS06960 (NCTC12067_01385) speC 1382297..1383004 (+) 708 WP_002988478.1 streptococcal pyrogenic exotoxin SpeC -
  DQL02_RS06965 (NCTC12067_01386) - 1383072..1384274 (-) 1203 WP_021775297.1 glucosaminidase domain-containing protein -
  DQL02_RS06970 (NCTC12067_01388) - 1384387..1384572 (-) 186 WP_011184796.1 holin -
  DQL02_RS06975 (NCTC12067_01389) - 1384569..1384868 (-) 300 WP_011018110.1 hypothetical protein -
  DQL02_RS06980 (NCTC12067_01390) - 1384879..1385496 (-) 618 WP_029714007.1 DUF1366 domain-containing protein -
  DQL02_RS06985 (NCTC12067_01391) - 1385499..1385927 (-) 429 WP_011018112.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6865.91 Da        Isoelectric Point: 3.9764

>NTDB_id=1019906 DQL02_RS06950 WP_047149504.1 1381006..1381188(-) (prx) [Streptococcus pyogenes strain NCTC12067]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPGEPVRPWEVMTVEVAGEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1019906 DQL02_RS06950 WP_047149504.1 1381006..1381188(-) (prx) [Streptococcus pyogenes strain NCTC12067]
ATGCTAACATACGACGAATTTAAACAAGCAATTGACAATGGATATATCACAGCAGACACAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCCGGTGAGCCTGTGAGACCGTGGGAGGTTATGACAGTTGAAGTAGCGGGAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS8232

71.667

100

0.717
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

75.61

68.333

0.517