Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL37_RS10045 Genome accession   NZ_LS483352
Coordinates   1748044..1748205 (+) Length   53 a.a.
NCBI ID   WP_309543630.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1743044..1753205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS09115 (NCTC12052_01797) - 1743181..1744962 (+) 1782 WP_111685861.1 gp58-like family protein -
  DQL37_RS09120 (NCTC12052_01798) - 1744971..1745399 (+) 429 WP_111685862.1 DUF1617 family protein -
  DQL37_RS09125 (NCTC12052_01799) - 1745402..1746040 (+) 639 WP_111685863.1 hypothetical protein -
  DQL37_RS09130 (NCTC12052_01800) - 1746050..1746322 (+) 273 WP_111685864.1 hypothetical protein -
  DQL37_RS09135 (NCTC12052_01801) - 1746319..1746546 (+) 228 WP_003058873.1 phage holin -
  DQL37_RS09140 (NCTC12052_01803) - 1746662..1747879 (+) 1218 WP_111685865.1 peptidoglycan amidohydrolase family protein -
  DQL37_RS10045 (NCTC12052_01804) prx 1748044..1748205 (+) 162 WP_309543630.1 hypothetical protein Regulator
  DQL37_RS09155 (NCTC12052_01806) ahpC 1748757..1749317 (+) 561 WP_002982304.1 alkyl hydroperoxide reductase subunit C -
  DQL37_RS09160 (NCTC12052_01807) ahpF 1749338..1750870 (+) 1533 WP_002982300.1 alkyl hydroperoxide reductase subunit F -
  DQL37_RS09165 (NCTC12052_01808) hutI 1750928..1752193 (-) 1266 WP_002982296.1 imidazolonepropionase -

Sequence

Protein


Download         Length: 53 a.a.        Molecular weight: 6122.18 Da        Isoelectric Point: 6.4475

>NTDB_id=1019739 DQL37_RS10045 WP_309543630.1 1748044..1748205(+) (prx) [Streptococcus pyogenes strain NCTC12052]
MLTYDEFKQAIDDGYITADTVAILAIFLKKILLKNSREFAHHLPTNFIIINQI

Nucleotide


Download         Length: 162 bp        

>NTDB_id=1019739 DQL37_RS10045 WP_309543630.1 1748044..1748205(+) (prx) [Streptococcus pyogenes strain NCTC12052]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGATGACGGCTATATCACAGCAGACACAGTAGCGATCTTAGCTATTTT
TTTGAAAAAAATTCTCCTGAAGAACTCAAGAGAATTTGCCCACCATTTGCCCACCAACTTTATCATAATTAACCAAATTT
AA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

61.364

83.019

0.509
  prx Streptococcus pyogenes MGAS315

61.364

83.019

0.509
  prx Streptococcus pyogenes MGAS315

56.25

90.566

0.509
  prx Streptococcus pyogenes MGAS315

56.818

83.019

0.472
  prx Streptococcus pyogenes MGAS315

56.818

83.019

0.472
  prx Streptococcus pyogenes MGAS315

50

83.019

0.415
  prx Streptococcus pyogenes MGAS8232

83.333

45.283

0.377