Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL37_RS06175 Genome accession   NZ_LS483352
Coordinates   1179950..1180132 (-) Length   60 a.a.
NCBI ID   WP_014635572.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12052     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1174950..1185132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL37_RS06160 (NCTC12052_01227) - 1175388..1176083 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DQL37_RS06165 (NCTC12052_01228) - 1176322..1177257 (+) 936 WP_023610138.1 dihydroorotate oxidase -
  DQL37_RS09735 - 1177312..1177485 (-) 174 WP_011017962.1 hypothetical protein -
  DQL37_RS06170 (NCTC12052_01229) - 1177557..1179419 (-) 1863 WP_002994378.1 heavy metal translocating P-type ATPase -
  DQL37_RS06175 (NCTC12052_01230) prx 1179950..1180132 (-) 183 WP_014635572.1 hypothetical protein Regulator
  DQL37_RS06180 (NCTC12052_01231) mf2 1180372..1181130 (+) 759 WP_014635573.1 DNase Mf2 -
  DQL37_RS06185 (NCTC12052_01232) speC 1181241..1181948 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  DQL37_RS06190 (NCTC12052_01233) - 1182017..1183234 (-) 1218 WP_014635574.1 peptidoglycan amidohydrolase family protein -
  DQL37_RS06195 (NCTC12052_01235) - 1183353..1183580 (-) 228 WP_003058873.1 phage holin -
  DQL37_RS06200 (NCTC12052_01236) - 1183577..1183849 (-) 273 WP_011017397.1 hypothetical protein -
  DQL37_RS06205 (NCTC12052_01237) - 1183861..1184493 (-) 633 WP_111685784.1 hypothetical protein -
  DQL37_RS06210 (NCTC12052_01238) - 1184496..1184924 (-) 429 WP_011528780.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7067.01 Da        Isoelectric Point: 4.1079

>NTDB_id=1019699 DQL37_RS06175 WP_014635572.1 1179950..1180132(-) (prx) [Streptococcus pyogenes strain NCTC12052]
MLTYDEFKQAIDNGYITGDTVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1019699 DQL37_RS06175 WP_014635572.1 1179950..1180132(-) (prx) [Streptococcus pyogenes strain NCTC12052]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAACGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90

100

0.9
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

85.714

70

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment