Detailed information NTG1019570

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB0R89_RS16940
• Genome accession: NZ_CP160218
• Coordinates: 3488169..3489332 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain AP45
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3483169..3494332

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB0R89_RS16910 (AB0R89_16910)	-	3483433..3483852 (-)	420	WP_043020594.1	TIGR03826 family flagellar region protein	-
AB0R89_RS16915 (AB0R89_16915)	comFC	3483926..3484615 (-)	690	WP_235611321.1	phosphoribosyltransferase family protein	Machinery gene
AB0R89_RS16920 (AB0R89_16920)	-	3484621..3484905 (-)	285	WP_007407481.1	competence protein ComFB	-
AB0R89_RS16925 (AB0R89_16925)	comFA	3484963..3486348 (-)	1386	WP_043020592.1	DEAD/DEAH box helicase	Machinery gene
AB0R89_RS16930 (AB0R89_16930)	-	3486457..3487305 (-)	849	WP_003151387.1	DegV family protein	-
AB0R89_RS16935 (AB0R89_16935)	degU	3487403..3488092 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
AB0R89_RS16940 (AB0R89_16940)	degS	3488169..3489332 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
AB0R89_RS16945 (AB0R89_16945)	-	3489555..3490202 (+)	648	WP_007407485.1	YigZ family protein	-
AB0R89_RS16950 (AB0R89_16950)	-	3490207..3491466 (+)	1260	WP_043020591.1	LCP family protein	-
AB0R89_RS16955 (AB0R89_16955)	-	3491565..3492641 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
AB0R89_RS16960 (AB0R89_16960)	-	3492774..3493970 (-)	1197	WP_043021844.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1019570 AB0R89_RS16940 WP_007407484.1 3488169..3489332(-) (degS) [Bacillus velezensis strain AP45]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1019570 AB0R89_RS16940 WP_007407484.1 3488169..3489332(-) (degS) [Bacillus velezensis strain AP45]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCATGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951