Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQM50_RS03370 Genome accession   NZ_LS483347
Coordinates   614817..614999 (+) Length   60 a.a.
NCBI ID   WP_011054793.1    Uniprot ID   A0A0H2UWN8
Organism   Streptococcus pyogenes strain NCTC8324     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 609817..619999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM50_RS10225 (NCTC8324_00669) - 609874..609996 (+) 123 WP_015055953.1 hypothetical protein -
  DQM50_RS03330 (NCTC8324_00670) - 610010..610333 (+) 324 WP_015055952.1 hypothetical protein -
  DQM50_RS03335 (NCTC8324_00671) - 610333..610665 (+) 333 WP_011054798.1 phage holin -
  DQM50_RS03340 (NCTC8324_00672) - 610667..611431 (+) 765 WP_011054797.1 CHAP domain-containing protein -
  DQM50_RS03345 (NCTC8324_00673) - 611443..612045 (+) 603 WP_111688434.1 hypothetical protein -
  DQM50_RS03350 (NCTC8324_00674) - 612056..612829 (+) 774 WP_011054795.1 hypothetical protein -
  DQM50_RS03355 (NCTC8324_00675) - 612839..613060 (+) 222 WP_009880241.1 hypothetical protein -
  DQM50_RS03360 (NCTC8324_00676) - 613060..613719 (+) 660 WP_009880240.1 hypothetical protein -
  DQM50_RS03365 (NCTC8324_00677) speA 613841..614596 (-) 756 WP_009880239.1 streptococcal pyrogenic exotoxin SpeA -
  DQM50_RS03370 (NCTC8324_00678) prx 614817..614999 (+) 183 WP_011054793.1 hypothetical protein Regulator
  DQM50_RS03375 (NCTC8324_00679) rlmD 615190..616545 (+) 1356 WP_085613935.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  DQM50_RS03380 (NCTC8324_00680) rocA 617210..618565 (+) 1356 WP_111688435.1 transcriptional regulator RocA -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7014.08 Da        Isoelectric Point: 4.3313

>NTDB_id=1019181 DQM50_RS03370 WP_011054793.1 614817..614999(+) (prx) [Streptococcus pyogenes strain NCTC8324]
MLYIDEFKEAIDKGYILGDTVAIVRKNGKIFDYVLPHEKVRDDEVVTVERVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1019181 DQM50_RS03370 WP_011054793.1 614817..614999(+) (prx) [Streptococcus pyogenes strain NCTC8324]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGATAAGGGGTATATTTTAGGTGACACAGTAGCGATAGTGCGTAAAAA
CGGAAAGATATTTGATTATGTGTTACCACACGAAAAAGTGAGAGATGATGAAGTTGTGACGGTAGAGAGAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 6CKA
  PDB 7N10
  PDB 7N1N
  PDB 8VSR

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

100

100

1
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS8232

75

100

0.75
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683
  prx Streptococcus pyogenes MGAS315

76.19

70

0.533