Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL08_RS05610 Genome accession   NZ_LS483336
Coordinates   1109973..1110155 (-) Length   60 a.a.
NCBI ID   WP_011184726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12046     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1104973..1115155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL08_RS05595 (NCTC12046_01110) - 1105409..1106104 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DQL08_RS05600 (NCTC12046_01111) - 1106343..1107278 (+) 936 WP_023611666.1 dihydroorotate oxidase -
  DQL08_RS05605 (NCTC12046_01113) - 1107578..1109440 (-) 1863 WP_023611676.1 heavy metal translocating P-type ATPase -
  DQL08_RS05610 (NCTC12046_01114) prx 1109973..1110155 (-) 183 WP_011184726.1 hypothetical protein Regulator
  DQL08_RS05615 (NCTC12046_01115) mf2 1110395..1111153 (+) 759 WP_011184727.1 DNase Mf2 -
  DQL08_RS05620 (NCTC12046_01116) speC 1111264..1111971 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  DQL08_RS05625 (NCTC12046_01117) - 1112040..1112792 (-) 753 WP_023611694.1 CHAP domain-containing protein -
  DQL08_RS05630 (NCTC12046_01118) - 1112794..1113126 (-) 333 WP_021733507.1 phage holin -
  DQL08_RS05635 (NCTC12046_01119) - 1113139..1113459 (-) 321 WP_021733504.1 hypothetical protein -
  DQL08_RS05640 (NCTC12046_01120) - 1113470..1114081 (-) 612 WP_111687957.1 DUF1366 domain-containing protein -
  DQL08_RS05645 (NCTC12046_01121) - 1114084..1114515 (-) 432 WP_002987513.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6936.91 Da        Isoelectric Point: 4.1954

>NTDB_id=1018281 DQL08_RS05610 WP_011184726.1 1109973..1110155(-) (prx) [Streptococcus pyogenes strain NCTC12046]
MLTYDEFKQAIDNGYITADTVMIVRKNGQIFDYVLPNEKIKNGEIVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1018281 DQL08_RS05610 WP_011184726.1 1109973..1110155(-) (prx) [Streptococcus pyogenes strain NCTC12046]
ATGCTAACATACGACGAATTTAAGCAAGCAATTGACAATGGATATATCACAGCAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAAGAATGGAGAAATTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

98.333

100

0.983
  prx Streptococcus pyogenes MGAS8232

86.667

100

0.867
  prx Streptococcus pyogenes MGAS315

78.333

100

0.783
  prx Streptococcus pyogenes MGAS315

75

100

0.75
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

71.429

70

0.5

Multiple sequence alignment