Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL59_RS04540 Genome accession   NZ_LS483326
Coordinates   895244..895426 (-) Length   60 a.a.
NCBI ID   WP_011017964.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12045     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 890244..900426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL59_RS04525 (NCTC12045_00897) - 890682..891377 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DQL59_RS04530 (NCTC12045_00898) - 891616..892551 (+) 936 WP_002989136.1 dihydroorotate oxidase -
  DQL59_RS04535 (NCTC12045_00899) - 892851..894713 (-) 1863 WP_032464445.1 heavy metal translocating P-type ATPase -
  DQL59_RS04540 (NCTC12045_00900) prx 895244..895426 (-) 183 WP_011017964.1 hypothetical protein Regulator
  DQL59_RS04550 (NCTC12045_00902) - 895772..896347 (-) 576 WP_011054727.1 hypothetical protein -
  DQL59_RS04555 (NCTC12045_00903) spek 896823..897602 (-) 780 WP_038432391.1 streptococcal pyrogenic exotoxin SpeK -
  DQL59_RS04560 (NCTC12045_00904) - 897987..898580 (-) 594 WP_003051628.1 GNAT family N-acetyltransferase -
  DQL59_RS04565 (NCTC12045_00905) - 898580..898744 (-) 165 WP_021340366.1 hypothetical protein -
  DQL59_RS04570 (NCTC12045_00906) - 898893..899534 (-) 642 Protein_847 CHAP domain-containing protein -
  DQL59_RS04575 (NCTC12045_00907) - 899647..900339 (-) 693 WP_111681172.1 AP2 domain-containing protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6841.79 Da        Isoelectric Point: 4.5183

>NTDB_id=1017387 DQL59_RS04540 WP_011017964.1 895244..895426(-) (prx) [Streptococcus pyogenes strain NCTC12045]
MLTYDEFKQAIDNGYIAGDTVAIVRKDGQIFDYVLPHEKVKNGEVVTKEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1017387 DQL59_RS04540 WP_011017964.1 895244..895426(-) (prx) [Streptococcus pyogenes strain NCTC12045]
ATGCTAACATACGACGAGTTTAAGCAAGCGATTGACAATGGATATATCGCAGGCGATACAGTAGCGATCGTGCGTAAAGA
CGGACAGATTTTTGATTATGTGTTGCCACATGAGAAAGTAAAGAATGGAGAAGTTGTGACTAAGGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

100

100

1
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

90.244

68.333

0.617
  prx Streptococcus pyogenes MGAS315

83.721

71.667

0.6
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55