Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQL31_RS06375 Genome accession   NZ_LS483320
Coordinates   1207432..1207614 (-) Length   60 a.a.
NCBI ID   WP_111677352.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC5164     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202432..1212614
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQL31_RS06360 (NCTC5164_01275) - 1202868..1203563 (-) 696 WP_002983928.1 phosphoglycerate mutase -
  DQL31_RS06365 (NCTC5164_01276) - 1203802..1204737 (+) 936 WP_111677350.1 dihydroorotate oxidase -
  DQL31_RS06370 (NCTC5164_01277) - 1205037..1206899 (-) 1863 WP_111677351.1 heavy metal translocating P-type ATPase -
  DQL31_RS06375 (NCTC5164_01278) prx 1207432..1207614 (-) 183 WP_111677352.1 Paratox Regulator
  DQL31_RS06380 (NCTC5164_01279) mf2 1207854..1208612 (+) 759 WP_011184727.1 DNase Mf2 -
  DQL31_RS06385 (NCTC5164_01280) speC 1208723..1209430 (+) 708 WP_002985327.1 streptococcal pyrogenic exotoxin SpeC -
  DQL31_RS06390 (NCTC5164_01281) - 1209499..1210251 (-) 753 WP_002993615.1 CHAP domain-containing protein -
  DQL31_RS06395 (NCTC5164_01283) - 1210369..1210824 (-) 456 WP_011184730.1 phage holin family protein -
  DQL31_RS06400 (NCTC5164_01284) - 1210835..1211473 (-) 639 WP_023610893.1 hypothetical protein -
  DQL31_RS06405 (NCTC5164_01285) - 1211476..1211904 (-) 429 WP_014411850.1 DUF1617 family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7051.01 Da        Isoelectric Point: 4.1079

>NTDB_id=1016932 DQL31_RS06375 WP_111677352.1 1207432..1207614(-) (prx) [Streptococcus pyogenes strain NCTC5164]
MLTYDEFKQAIDNGYITADAVMIVRKNGQIFDYVLPNEKIRDWEVVTDEKVEEVLVELSR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1016932 DQL31_RS06375 WP_111677352.1 1207432..1207614(-) (prx) [Streptococcus pyogenes strain NCTC5164]
ATGCTAACATACGACGAATTTAAGCAAGCGATTGACAATGGATATATCACAGCAGACGCAGTAATGATCGTGCGCAAGAA
CGGACAGATTTTTGATTATGTGTTGCCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGACGAAAAAGTGGAAGAGG
TGCTGGTGGAGCTTTCGAGATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

90

100

0.9
  prx Streptococcus pyogenes MGAS8232

81.667

100

0.817
  prx Streptococcus pyogenes MGAS315

76.667

100

0.767
  prx Streptococcus pyogenes MGAS315

73.333

100

0.733
  prx Streptococcus pyogenes MGAS315

85.366

68.333

0.583
  prx Streptococcus pyogenes MGAS315

80.952

70

0.567
  prx Streptococcus pyogenes MGAS315

73.81

70

0.517