Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABNX04_RS16550 | Genome accession | NZ_CP159868 |
| Coordinates | 3391844..3392440 (+) | Length | 198 a.a. |
| NCBI ID | WP_003151513.1 | Uniprot ID | I2CAH7 |
| Organism | Bacillus velezensis strain JLU-1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3386844..3397440
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNX04_RS16525 (ABNX04_16525) | - | 3386857..3387168 (+) | 312 | WP_025649315.1 | hypothetical protein | - |
| ABNX04_RS16535 (ABNX04_16535) | - | 3387519..3388988 (-) | 1470 | WP_354664731.1 | glycoside hydrolase family 32 protein | - |
| ABNX04_RS16540 (ABNX04_16540) | - | 3389003..3390235 (-) | 1233 | WP_012118526.1 | MFS transporter | - |
| ABNX04_RS16545 (ABNX04_16545) | - | 3390626..3391600 (+) | 975 | WP_354664732.1 | LacI family DNA-binding transcriptional regulator | - |
| ABNX04_RS16550 (ABNX04_16550) | clpP | 3391844..3392440 (+) | 597 | WP_003151513.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ABNX04_RS16555 (ABNX04_16555) | - | 3392484..3393344 (-) | 861 | WP_003151510.1 | LysR family transcriptional regulator | - |
| ABNX04_RS16560 (ABNX04_16560) | - | 3393518..3394648 (+) | 1131 | WP_354664733.1 | PrpF domain-containing protein | - |
| ABNX04_RS16565 (ABNX04_16565) | - | 3394692..3396068 (+) | 1377 | WP_038459976.1 | MFS transporter | - |
| ABNX04_RS16570 (ABNX04_16570) | - | 3396264..3396839 (-) | 576 | WP_015387658.1 | TIGR00730 family Rossman fold protein | - |
| ABNX04_RS16575 (ABNX04_16575) | - | 3396955..3397275 (+) | 321 | WP_003151506.1 | MazG-like family protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21831.06 Da Isoelectric Point: 4.6982
>NTDB_id=1016306 ABNX04_RS16550 WP_003151513.1 3391844..3392440(+) (clpP) [Bacillus velezensis strain JLU-1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSADEALEYGLIDKVLTRNTEDQK
Nucleotide
Download Length: 597 bp
>NTDB_id=1016306 ABNX04_RS16550 WP_003151513.1 3391844..3392440(+) (clpP) [Bacillus velezensis strain JLU-1]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGTCCTGGCGGATCAATCACTGCCGGCATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCTTATGACATTTACTCCCGTCTTTTGAAGGA
CCGTATTATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCCTTGAAGCGG
AAGACCCTGAAAAAGATATTTCCATTTACATTAACAGTCCTGGCGGATCAATCACTGCCGGCATGGCAATCTATGATACA
ATGCAGTTCATTAAACCGAAAGTATCCACGATCTGCATCGGTATGGCCGCTTCTATGGGAGCATTTTTACTTGCAGCCGG
AGAAAAAGGCAAACGTTACGCGCTTCCTAACAGTGAAGTTATGATTCACCAGCCGCTTGGCGGAGCGCAAGGACAGGCGA
CAGAAATTGAAATCGCGGCAAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTGCTTGCTGAACGTACCGGCCAG
CCGCTTGAAGTCATTGAGCGCGATACAGACCGCGACAACTTCAAATCAGCTGATGAAGCCTTAGAATACGGCTTAATCGA
TAAAGTGCTGACACGCAATACAGAAGACCAGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
95.96 |
100 |
0.96 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.586 |
96.465 |
0.662 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus thermophilus LMD-9 |
58.549 |
97.475 |
0.571 |
| clpP | Streptococcus pneumoniae D39 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae Rx1 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae R6 |
57.216 |
97.98 |
0.561 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.216 |
97.98 |
0.561 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
56.701 |
97.98 |
0.556 |
| clpP | Streptococcus pyogenes JRS4 |
55.44 |
97.475 |
0.54 |
| clpP | Streptococcus pyogenes MGAS315 |
55.44 |
97.475 |
0.54 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
54.639 |
97.98 |
0.535 |
| clpP | Streptococcus mutans UA159 |
54.639 |
97.98 |
0.535 |