Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H1W89_RS09805 Genome accession   NZ_LR822029
Coordinates   965315..965533 (-) Length   72 a.a.
NCBI ID   WP_011681105.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_1035     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 960315..970533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H1W89_RS05080 (STHERMO_1099) cas1 960477..961481 (-) 1005 WP_014727507.1 CRISPR-associated endonuclease Cas1 -
  H1W89_RS05085 (STHERMO_1100) - 961620..962567 (-) 948 WP_014608279.1 dihydroorotate dehydrogenase -
  H1W89_RS05090 (STHERMO_1101) - 962586..963359 (-) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  H1W89_RS05095 - 963358..963573 (+) 216 WP_011681107.1 hypothetical protein -
  H1W89_RS05100 (STHERMO_1102) - 963630..964178 (-) 549 WP_014608278.1 DJ-1 family glyoxalase III -
  H1W89_RS10425 - 964220..964444 (-) 225 WP_011227180.1 TraX family protein -
  H1W89_RS05110 (STHERMO_1103) - 964445..965113 (-) 669 WP_014621543.1 TraX family protein -
  H1W89_RS09805 (STHERMO_1104) prx 965315..965533 (-) 219 WP_011681105.1 hypothetical protein Regulator
  H1W89_RS05115 (STHERMO_1105) - 965970..966161 (-) 192 WP_011681104.1 hypothetical protein -
  H1W89_RS05120 (STHERMO_1106) - 966165..966650 (-) 486 WP_014607832.1 NUDIX hydrolase -
  H1W89_RS05125 (STHERMO_1107) - 966956..967912 (-) 957 WP_232085833.1 DUF6994 family protein -
  H1W89_RS05130 (STHERMO_1108) - 968235..969893 (+) 1659 WP_014608275.1 NFACT family protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8147.18 Da        Isoelectric Point: 4.4665

>NTDB_id=1010565 H1W89_RS09805 WP_011681105.1 965315..965533(-) (prx) [Streptococcus thermophilus isolate STH_CIRM_1035]
MNSIGKENNIILTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 219 bp        

>NTDB_id=1010565 H1W89_RS09805 WP_011681105.1 965315..965533(-) (prx) [Streptococcus thermophilus isolate STH_CIRM_1035]
ATGAATAGCATAGGAAAGGAGAATAATATAATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAA
AGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACG
AAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

80.556

0.472
  prx Streptococcus pyogenes MGAS8232

57.627

81.944

0.472
  prx Streptococcus pyogenes MGAS315

55.932

81.944

0.458
  prx Streptococcus pyogenes MGAS315

55.172

80.556

0.444
  prx Streptococcus pyogenes MGAS315

73.81

58.333

0.431
  prx Streptococcus pyogenes MGAS315

65.909

61.111

0.403
  prx Streptococcus pyogenes MGAS315

68.293

56.944

0.389