Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | ABN702_RS09145 | Genome accession | NZ_CP158164 |
| Coordinates | 1799935..1800513 (+) | Length | 192 a.a. |
| NCBI ID | WP_417900387.1 | Uniprot ID | - |
| Organism | Bacillus sp. CSS-39 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1794935..1805513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABN702_RS09115 (ABN702_09095) | - | 1794996..1795742 (+) | 747 | WP_417900381.1 | alpha/beta hydrolase | - |
| ABN702_RS09120 (ABN702_09100) | - | 1795904..1796866 (+) | 963 | WP_417900382.1 | rhodanese-related sulfurtransferase | - |
| ABN702_RS09125 (ABN702_09105) | - | 1796905..1797099 (-) | 195 | WP_417900383.1 | hypothetical protein | - |
| ABN702_RS09130 (ABN702_09110) | fumC | 1797284..1798684 (+) | 1401 | WP_417900384.1 | class II fumarate hydratase | - |
| ABN702_RS09135 (ABN702_09115) | - | 1798748..1799074 (-) | 327 | WP_417900385.1 | hypothetical protein | - |
| ABN702_RS09140 (ABN702_09120) | - | 1799252..1799914 (+) | 663 | WP_417900386.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| ABN702_RS09145 (ABN702_09125) | clpP | 1799935..1800513 (+) | 579 | WP_417900387.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| ABN702_RS09150 (ABN702_09130) | - | 1800631..1801107 (+) | 477 | WP_417900388.1 | GyrI-like domain-containing protein | - |
| ABN702_RS09155 (ABN702_09135) | - | 1801135..1801656 (+) | 522 | WP_417900389.1 | cupin domain-containing protein | - |
| ABN702_RS09160 (ABN702_09140) | - | 1801812..1803146 (+) | 1335 | WP_417900390.1 | spore germination protein | - |
| ABN702_RS09165 (ABN702_09145) | - | 1803139..1804233 (+) | 1095 | WP_417900391.1 | GerAB/ArcD/ProY family transporter | - |
| ABN702_RS09170 (ABN702_09150) | - | 1804226..1805296 (+) | 1071 | WP_417900392.1 | Ger(x)C family spore germination protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 21135.32 Da Isoelectric Point: 4.8780
>NTDB_id=1010027 ABN702_RS09145 WP_417900387.1 1799935..1800513(+) (clpP) [Bacillus sp. CSS-39]
MNMIPYVIEHSNNGERSYDIYSRLLKDRIIMIGDEITDQLANSVVAQLLFLAADDPEKDISIYINSPGGSTTAGFAILDT
MNYIKPDVRTICIGMAASFGALLLMAGKKGKRLALPNSEIMIHQPLGGARGQATEIEISARRILKLREDINQMISDLTGQ
PVEKVTKDTDRDNFMTAAEAKSYGIVDEVIQK
MNMIPYVIEHSNNGERSYDIYSRLLKDRIIMIGDEITDQLANSVVAQLLFLAADDPEKDISIYINSPGGSTTAGFAILDT
MNYIKPDVRTICIGMAASFGALLLMAGKKGKRLALPNSEIMIHQPLGGARGQATEIEISARRILKLREDINQMISDLTGQ
PVEKVTKDTDRDNFMTAAEAKSYGIVDEVIQK
Nucleotide
Download Length: 579 bp
>NTDB_id=1010027 ABN702_RS09145 WP_417900387.1 1799935..1800513(+) (clpP) [Bacillus sp. CSS-39]
ATGAATATGATTCCATATGTCATTGAACACTCGAATAACGGGGAAAGGTCTTACGATATTTATTCAAGGCTATTGAAGGA
CAGAATCATCATGATAGGAGATGAAATAACCGACCAATTAGCAAACAGCGTCGTGGCACAATTGCTATTTCTGGCAGCAG
ACGACCCCGAAAAGGATATTTCCATCTATATCAATAGCCCCGGTGGTTCCACAACTGCGGGTTTTGCCATCCTGGACACC
ATGAACTATATCAAACCCGATGTCAGAACGATCTGTATTGGAATGGCTGCATCATTTGGGGCACTTTTACTGATGGCCGG
AAAGAAAGGGAAGCGGCTCGCACTGCCAAATAGTGAAATCATGATTCATCAACCTTTGGGCGGAGCAAGGGGGCAGGCTA
CGGAAATCGAGATCTCAGCCAGAAGAATCCTTAAGCTAAGAGAGGATATCAATCAGATGATTTCAGATCTGACAGGGCAG
CCTGTAGAGAAAGTGACAAAGGATACAGACCGTGACAATTTTATGACAGCAGCTGAAGCGAAATCGTATGGAATAGTAGA
TGAAGTAATACAAAAATAA
ATGAATATGATTCCATATGTCATTGAACACTCGAATAACGGGGAAAGGTCTTACGATATTTATTCAAGGCTATTGAAGGA
CAGAATCATCATGATAGGAGATGAAATAACCGACCAATTAGCAAACAGCGTCGTGGCACAATTGCTATTTCTGGCAGCAG
ACGACCCCGAAAAGGATATTTCCATCTATATCAATAGCCCCGGTGGTTCCACAACTGCGGGTTTTGCCATCCTGGACACC
ATGAACTATATCAAACCCGATGTCAGAACGATCTGTATTGGAATGGCTGCATCATTTGGGGCACTTTTACTGATGGCCGG
AAAGAAAGGGAAGCGGCTCGCACTGCCAAATAGTGAAATCATGATTCATCAACCTTTGGGCGGAGCAAGGGGGCAGGCTA
CGGAAATCGAGATCTCAGCCAGAAGAATCCTTAAGCTAAGAGAGGATATCAATCAGATGATTTCAGATCTGACAGGGCAG
CCTGTAGAGAAAGTGACAAAGGATACAGACCGTGACAATTTTATGACAGCAGCTGAAGCGAAATCGTATGGAATAGTAGA
TGAAGTAATACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
69.474 |
98.958 |
0.688 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
67.895 |
98.958 |
0.672 |
| clpP | Streptococcus thermophilus LMG 18311 |
56.316 |
98.958 |
0.557 |
| clpP | Streptococcus thermophilus LMD-9 |
56.316 |
98.958 |
0.557 |
| clpP | Streptococcus pneumoniae D39 |
54.737 |
98.958 |
0.542 |
| clpP | Streptococcus pneumoniae Rx1 |
54.737 |
98.958 |
0.542 |
| clpP | Streptococcus pneumoniae R6 |
54.737 |
98.958 |
0.542 |
| clpP | Streptococcus pneumoniae TIGR4 |
54.737 |
98.958 |
0.542 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
52.88 |
99.479 |
0.526 |
| clpP | Streptococcus pyogenes JRS4 |
52.356 |
99.479 |
0.521 |
| clpP | Streptococcus pyogenes MGAS315 |
52.356 |
99.479 |
0.521 |
| clpP | Streptococcus mutans UA159 |
52.083 |
100 |
0.521 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
51.309 |
99.479 |
0.51 |