Detailed information NTG1010010

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ABN702_RS00570
• Genome accession: NZ_CP158164
• Coordinates: 123693..124274 (-)
• Length: 193 a.a.
• NCBI ID: WP_204412509.1
• Uniprot ID: -
• Organism: Bacillus sp. CSS-39
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 118693..129274

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABN702_RS00540 (ABN702_00540)	-	119397..119855 (+)	459	WP_417898945.1	8-oxo-dGTP diphosphatase	-
ABN702_RS00545 (ABN702_00545)	rapZ	119874..120764 (+)	891	WP_386634664.1	RNase adapter RapZ	-
ABN702_RS00550 (ABN702_00550)	-	120764..121729 (+)	966	WP_417898946.1	gluconeogenesis factor YvcK family protein	-
ABN702_RS00555 (ABN702_00555)	whiA	121834..122778 (+)	945	WP_204412511.1	DNA-binding protein WhiA	-
ABN702_RS00560 (ABN702_00560)	-	122815..123072 (+)	258	WP_386634656.1	HPr family phosphocarrier protein	-
ABN702_RS00565 (ABN702_00565)	-	123072..123242 (+)	171	WP_417898947.1	hypothetical protein	-
ABN702_RS00570 (ABN702_00570)	clpP	123693..124274 (-)	582	WP_204412509.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ABN702_RS00580 (ABN702_00580)	rpoN	125452..126783 (+)	1332	WP_417898948.1	RNA polymerase factor sigma-54	-
ABN702_RS00585 (ABN702_00585)	-	126800..127042 (+)	243	WP_417898949.1	glutaredoxin family protein	-
ABN702_RS00590 (ABN702_00590)	-	127188..128207 (+)	1020	WP_386634646.1	sugar-binding transcriptional regulator	-
ABN702_RS00595 (ABN702_00595)	gap	128256..129263 (+)	1008	WP_417898950.1	type I glyceraldehyde-3-phosphate dehydrogenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21011.21 Da
• Isoelectric Point: 4.8417

>NTDB_id=1010010 ABN702_RS00570 WP_204412509.1 123693..124274(-) (clpP) [Bacillus sp. CSS-39]
MNLIPTVIEQTSRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDISLYINSPGGSITAGMAIYDT
MNFIKPNVSTMCVGMAASMGAFLLSAGAKGKRFALPSSEVMIHQPLGGAQGQATEIEIAAKRILFLREKLNTILSENTGQ
PIEVISRDTDRDNFMTAERALEYGLIDKVIKNN

Nucleotide

• Length: 582 bp

>NTDB_id=1010010 ABN702_RS00570 WP_204412509.1 123693..124274(-) (clpP) [Bacillus sp. CSS-39]
ATGAACTTAATTCCTACAGTTATTGAACAAACGAGCCGTGGAGAGCGTGCATATGACATCTACTCCCGTCTTTTAAAAGA
CCGCATTATCCTGCTTGGAAGTGCAATTGACGACAACGTGGCAAACTCCATTGTTGCTCAGCTTCTATTCCTGGCAGCGG
AAGATCCAGAAAAGGATATCTCGCTTTACATCAATAGCCCAGGCGGATCCATTACTGCCGGTATGGCAATTTACGACACA
ATGAACTTCATCAAGCCAAACGTCAGCACGATGTGTGTAGGTATGGCGGCTTCCATGGGAGCATTCCTACTTTCTGCAGG
TGCAAAAGGCAAACGCTTTGCGCTACCAAGCTCTGAAGTCATGATTCACCAACCACTTGGCGGTGCACAAGGCCAGGCAA
CAGAAATCGAGATCGCTGCAAAACGCATCCTATTCCTACGCGAAAAGCTGAACACCATCCTTTCCGAAAACACAGGCCAG
CCGATCGAAGTAATCTCACGCGACACAGATCGTGACAACTTCATGACAGCTGAAAGAGCGCTTGAGTACGGATTGATTGA
TAAAGTTATTAAAAATAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (13-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	85.938	99.482	0.855
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	69.11	98.964	0.684
clpP	Streptococcus thermophilus LMD-9	60.622	100	0.606
clpP	Streptococcus thermophilus LMG 18311	60.622	100	0.606
clpP	Streptococcus pneumoniae D39	59.585	100	0.596
clpP	Streptococcus pneumoniae Rx1	59.585	100	0.596
clpP	Streptococcus pneumoniae R6	59.585	100	0.596
clpP	Streptococcus pneumoniae TIGR4	59.585	100	0.596
clpP	Streptococcus mutans UA159	58.763	100	0.591
clpP	Lactococcus lactis subsp. cremoris KW2	59.067	100	0.591
clpP	Streptococcus pyogenes JRS4	58.031	100	0.58
clpP	Streptococcus pyogenes MGAS315	58.031	100	0.58
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	56.995	100	0.57