Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   H0511_RS00400 Genome accession   NZ_LR822017
Coordinates   69377..69565 (+) Length   62 a.a.
NCBI ID   WP_111679075.1    Uniprot ID   -
Organism   Streptococcus thermophilus isolate STH_CIRM_336     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 64377..74565
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0511_RS00395 (STHERMO_0073) - 66906..68831 (-) 1926 WP_179974141.1 DNA methyltransferase -
  H0511_RS00400 (STHERMO_0074) prx 69377..69565 (+) 189 WP_111679075.1 hypothetical protein Regulator
  H0511_RS00405 (STHERMO_0075) - 69946..70635 (+) 690 WP_197709066.1 DUF3800 domain-containing protein -
  H0511_RS00410 (STHERMO_0077) argR 71105..71533 (+) 429 WP_024704313.1 arginine repressor -
  H0511_RS00415 (STHERMO_0078) - 71533..71892 (+) 360 WP_064355739.1 YlbF family regulator -
  H0511_RS00420 (STHERMO_0079) hexA 71885..74443 (+) 2559 WP_179974142.1 DNA mismatch repair protein MutS Machinery gene

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7133.08 Da        Isoelectric Point: 4.5837

>NTDB_id=1009705 H0511_RS00400 WP_111679075.1 69377..69565(+) (prx) [Streptococcus thermophilus isolate STH_CIRM_336]
MLTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILRLEKVSDIIKELGGDN

Nucleotide


Download         Length: 189 bp        

>NTDB_id=1009705 H0511_RS00400 WP_111679075.1 69377..69565(+) (prx) [Streptococcus thermophilus isolate STH_CIRM_336]
ATGCTAACCTATGATGAATTTAAAGAGGCAATGGACAATGGTTTTATTAAAGGTGATACTGTCCAGATTGTCCGAAAGAA
TGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACGAAATATTGAGATTAGAAAAAGTATCGGATA
TAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

60.345

93.548

0.565
  prx Streptococcus pyogenes MGAS8232

59.322

95.161

0.565
  prx Streptococcus pyogenes MGAS315

57.627

95.161

0.548
  prx Streptococcus pyogenes MGAS315

56.897

93.548

0.532
  prx Streptococcus pyogenes MGAS315

74.419

69.355

0.516
  prx Streptococcus pyogenes MGAS315

65.957

75.806

0.5
  prx Streptococcus pyogenes MGAS315

65.957

75.806

0.5