Detailed information NTG1008478

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ABM478_RS13890
• Genome accession: NZ_CP157848
• Coordinates: 2718423..2719004 (-)
• Length: 193 a.a.
• NCBI ID: WP_000991610.1
• Uniprot ID: A0A9W5QF48
• Organism: Bacillus cereus strain B9
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2713423..2724004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABM478_RS13860	-	2713453..2714268 (-)	816	WP_121868272.1	PP2C family serine/threonine-protein phosphatase	-
ABM478_RS13865	-	2714252..2714743 (-)	492	WP_002197849.1	HIT family protein	-
ABM478_RS13870	-	2714844..2715011 (-)	168	WP_002197850.1	hypothetical protein	-
ABM478_RS13875	-	2715313..2716149 (-)	837	WP_001084759.1	proline/glycine betaine ABC transporter permease	-
ABM478_RS13880	-	2716142..2717347 (-)	1206	WP_000370606.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
ABM478_RS13885	-	2717519..2718376 (+)	858	WP_098212921.1	glycine betaine ABC transporter substrate-binding protein	-
ABM478_RS13890	clpP	2718423..2719004 (-)	582	WP_000991610.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
ABM478_RS13895	-	2719026..2719712 (-)	687	WP_000337507.1	RNA polymerase subunit sigma-70	-
ABM478_RS13900	-	2719855..2720175 (+)	321	WP_001125388.1	2Fe-2S iron-sulfur cluster-binding protein	-
ABM478_RS13905	rpiA	2720180..2720842 (+)	663	WP_001049982.1	ribose 5-phosphate isomerase A	-
ABM478_RS13910	-	2720954..2721388 (+)	435	WP_001190865.1	GNAT family N-acetyltransferase	-
ABM478_RS13915	-	2721514..2722881 (-)	1368	WP_001065145.1	lytic polysaccharide monooxygenase	-

Sequence

Protein

• Length: 193 a.a.
• Molecular weight: 21192.45 Da
• Isoelectric Point: 5.0776

>NTDB_id=1008478 ABM478_RS13890 WP_000991610.1 2718423..2719004(-) (clpP) [Bacillus cereus strain B9]
MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTTAGFAILDT
MNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQ
PIERVAHDTERDYFMTAEEAKAYGIVDDVVTKK

Nucleotide

• Length: 582 bp

>NTDB_id=1008478 ABM478_RS13890 WP_000991610.1 2718423..2719004(-) (clpP) [Bacillus cereus strain B9]
ATGAATGCAATTCCATATGTAGTGGAACAAACGAAATTAGGAGAACGTTCCTATGATATATATTCAAGGTTATTAAAAGA
TCGTATTATTATTATCGGTTCAGAAATAAATGATCAAGTAGCGAGTAGTGTCGTAGCTCAATTATTATTTTTAGAAGCAG
AAGATGCAGAGAAAGATATATTTTTATACATTAATAGCCCCGGCGGATCAACGACAGCGGGATTTGCTATATTAGATACA
ATGAATTTAATTAAACCAGATGTGCAAACGCTGTGCATGGGCTTTGCGGCATCATTTGGTGCATTGCTATTATTATCTGG
AGCAAAAGGAAAACGGTTTGCGCTCCCTAACAGTGAAATTATGATTCATCAGCCGCTTGGTGGTGCACAAGGGCAAGCAA
CAGAAATTGAAATAACTGCGAAGAGAATATTAAAGTTAAAGCATGATATTAATAAAATGATTGCAGAAAAAACGGGGCAA
CCGATTGAAAGAGTAGCACATGATACAGAAAGAGATTATTTTATGACCGCAGAAGAAGCAAAGGCATATGGGATTGTAGA
TGATGTTGTTACGAAAAAATAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (14-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	68.586	98.964	0.679
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.196	97.927	0.658
clpP	Streptococcus pyogenes JRS4	56.085	97.927	0.549
clpP	Streptococcus pyogenes MGAS315	56.085	97.927	0.549
clpP	Streptococcus pneumoniae R6	55.208	99.482	0.549
clpP	Streptococcus pneumoniae TIGR4	55.208	99.482	0.549
clpP	Streptococcus pneumoniae Rx1	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMG 18311	55.208	99.482	0.549
clpP	Streptococcus thermophilus LMD-9	55.208	99.482	0.549
clpP	Streptococcus pneumoniae D39	55.208	99.482	0.549
clpP	Streptococcus mutans UA159	53.968	97.927	0.528
clpP	Lactococcus lactis subsp. cremoris KW2	52.381	97.927	0.513
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	50.265	97.927	0.492