Detailed information NTG1007451

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: ABKJ27_RS03130
• Genome accession: NZ_CP157578
• Coordinates: 687752..688342 (+)
• Length: 196 a.a.
• NCBI ID: WP_000613471.1
• Uniprot ID: A0A1E9GI28
• Organism: Streptococcus sp. KHUD_011
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 682752..693342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKJ27_RS03100 (ABKJ27_03115)	-	683048..683569 (-)	522	WP_000400054.1	DUF1697 domain-containing protein	-
ABKJ27_RS03105 (ABKJ27_03120)	-	683618..684790 (-)	1173	WP_410012023.1	NAD(P)/FAD-dependent oxidoreductase	-
ABKJ27_RS03110 (ABKJ27_03125)	-	684848..685693 (-)	846	WP_410012024.1	DegV family protein	-
ABKJ27_RS03115 (ABKJ27_03130)	-	685818..686375 (+)	558	WP_000004136.1	TetR/AcrR family transcriptional regulator	-
ABKJ27_RS03120 (ABKJ27_03135)	-	686394..686861 (+)	468	WP_000136976.1	deoxycytidylate deaminase	-
ABKJ27_RS03125 (ABKJ27_03140)	upp	686950..687579 (+)	630	WP_084868516.1	uracil phosphoribosyltransferase	-
ABKJ27_RS03130 (ABKJ27_03145)	clpP	687752..688342 (+)	591	WP_000613471.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
ABKJ27_RS03135 (ABKJ27_03150)	-	688421..688708 (+)	288	WP_153220036.1	YlbG family protein	-
ABKJ27_RS03140 (ABKJ27_03155)	-	688773..689933 (+)	1161	WP_045611943.1	ABC transporter substrate-binding protein	-
ABKJ27_RS03145 (ABKJ27_03160)	-	690156..691025 (+)	870	WP_000941427.1	branched-chain amino acid ABC transporter permease	-
ABKJ27_RS03150 (ABKJ27_03165)	-	691029..691985 (+)	957	WP_004256818.1	branched-chain amino acid ABC transporter permease	-
ABKJ27_RS03155 (ABKJ27_03170)	-	691985..692749 (+)	765	WP_049546694.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21352.38 Da
• Isoelectric Point: 4.4910

>NTDB_id=1007451 ABKJ27_RS03130 WP_000613471.1 687752..688342(+) (clpP) [Streptococcus sp. KHUD_011]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNILEKILAENSGQ
SIEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=1007451 ABKJ27_RS03130 WP_000613471.1 687752..688342(+) (clpP) [Streptococcus sp. KHUD_011]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCCTACGATATTTACTCACGTCTTCTAAAAGACCGCAT
CATTATGCTGACAGGTCCAGTTGAAGACAACATGGCTAACTCAGTTATTGCCCAGTTGCTTTTCTTGGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTCAATACACCAGGTGGTTCCGTTTCAGCTGGTTTGGCAATCGTTGATACTATGAAC
TTTATCAAGGCAGATGTCCAAACCATCGTTATGGGAATGGCTGCATCTATGGGAACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCAGAGTATATGATCCACCAACCAATGGGTGGTACAGGTGGTGGTACTCAACAAA
CCGATATGGCGATTGCTGCAGAACACTTGCTCAAAACTCGTAACATCTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATCGAAAAAGTCCATGCAGATGCAGAACGCGATAACTGGATGAGTGCCCAAGAAACACTTGAATATGGCTTTATTGA
TGAAATCATGGCCAACAATTCATTGAACTAA

Domains

Predicted by InterproScan.

• Clp protease (CLP_protease) (11-192)

3D structure

• AlphaFold DB: A0A1E9GI28

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	98.98	100	0.99
clpP	Streptococcus pneumoniae D39	98.98	100	0.99
clpP	Streptococcus pneumoniae R6	98.98	100	0.99
clpP	Streptococcus pneumoniae TIGR4	98.98	100	0.99
clpP	Streptococcus thermophilus LMG 18311	93.333	99.49	0.929
clpP	Streptococcus thermophilus LMD-9	93.333	99.49	0.929
clpP	Streptococcus pyogenes JRS4	91.282	99.49	0.908
clpP	Streptococcus pyogenes MGAS315	91.282	99.49	0.908
clpP	Streptococcus mutans UA159	86.224	100	0.862
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.128	99.49	0.847
clpP	Lactococcus lactis subsp. cremoris KW2	84.615	99.49	0.842
clpP	Bacillus subtilis subsp. subtilis str. 168	58.854	97.959	0.577
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.549	98.469	0.577