Detailed information NTG1006857

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ABLB98_RS12865
• Genome accession: NZ_CP157435
• Coordinates: 2680829..2681887 (-)
• Length: 352 a.a.
• NCBI ID: WP_348882397.1
• Uniprot ID: A0AB39KHW8
• Organism: Acinetobacter sp. XH1639
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2675829..2686887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLB98_RS12840 (ABLB98_12835)	aroK	2676123..2676689 (-)	567	WP_087535970.1	shikimate kinase AroK	-
ABLB98_RS12845 (ABLB98_12840)	pilQ	2676700..2678853 (-)	2154	WP_348882409.1	type IV pilus secretin PilQ	Machinery gene
ABLB98_RS12850 (ABLB98_12845)	pilP	2678915..2679442 (-)	528	WP_249570974.1	pilus assembly protein PilP	Machinery gene
ABLB98_RS12855 (ABLB98_12850)	pilO	2679442..2680191 (-)	750	WP_348882395.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABLB98_RS12860 (ABLB98_12855)	pilN	2680188..2680829 (-)	642	WP_348882396.1	PilN domain-containing protein	Machinery gene
ABLB98_RS12865 (ABLB98_12860)	comM	2680829..2681887 (-)	1059	WP_348882397.1	pilus assembly protein PilM	Machinery gene
ABLB98_RS12870 (ABLB98_12865)	ponA	2682050..2684602 (+)	2553	WP_348882398.1	penicillin-binding protein PBP1a	-
ABLB98_RS12875 (ABLB98_12870)	-	2684622..2685440 (-)	819	WP_348882399.1	putative RNA methyltransferase	-
ABLB98_RS12880 (ABLB98_12875)	mraY	2685499..2686617 (-)	1119	WP_004660135.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39078.77 Da
• Isoelectric Point: 4.6414

>NTDB_id=1006857 ABLB98_RS12865 WP_348882397.1 2680829..2681887(-) (comM) [Acinetobacter sp. XH1639]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYAVMPLPENSVVEKSIINPEAVGDALERVVNLANPHTRNVAI
AVPTSMVINKIIEMDADMTADEREVQIRMDAEQYIPFPLDEVSLDFEVLSDKLANPNRVNVLLVATRTENVDTRVEVLEL
ANLSAKIADVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGRQLTQDVQSRYGLSFEE
AGRAKKERTLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTISNPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1006857 ABLB98_RS12865 WP_348882397.1 2680829..2681887(-) (comM) [Acinetobacter sp. XH1639]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAGCT
CTCTGTAAAGAACGGTAGATATTGGGTTGAAAGCTATGCTGTGATGCCACTGCCTGAAAACAGTGTCGTAGAAAAAAGCA
TCATCAATCCAGAAGCAGTTGGTGACGCGCTTGAAAGAGTCGTTAACCTTGCTAATCCGCATACGAGGAATGTTGCTATA
GCTGTGCCAACTTCAATGGTGATTAATAAAATCATTGAAATGGATGCGGATATGACAGCCGATGAACGAGAAGTTCAAAT
TCGTATGGATGCTGAGCAATACATTCCGTTCCCATTGGATGAAGTAAGTCTAGATTTTGAAGTCTTATCTGACAAATTAG
CAAACCCAAATCGTGTAAATGTATTGTTAGTGGCAACGCGTACAGAAAATGTTGACACACGTGTAGAAGTTCTTGAGCTG
GCTAATTTATCTGCAAAAATTGCTGATGTTGAAAGTTATGCCATGGAACGTGCTTTCAGTGTATTCGCAGATACTTTGCC
AATGGGTGCAAACACAGTTGGTATTTTAGATATTGGTCATACTATGACCACCTTATCTGTCATGCAGAAAGGTAAAATTA
TCTATACACGTGAACAGGTATTTGGTGGTCGACAGCTAACCCAGGATGTTCAGAGCCGTTACGGTTTGTCTTTTGAAGAG
GCTGGGCGTGCGAAAAAAGAAAGAACACTGCCTGACGACTATGATACGGAAGTGCTCGAACCCTTTTTAGATGCCGTAGT
TCAACAGGCAGCTCGCTCACTTCAGTTTTTCTTTTCATCATCACAATTCAATGAGATTGACCATATTTTATTGGCAGGTG
GTAATGCCAATATTCCTGGTTTAGCCAAGTTGTTACAACAAAAACTAGGTTATCGCGTCACCATTTCCAATCCATTCTTA
CAAATGGGCTTTTCTCCGCAAATTGATATTAAAAAAATTGAAAATGATGCTTCCTCATTGATGGTTGCATGTGGTTTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	87.216	100	0.872
pilM	Acinetobacter baumannii D1279779	86.932	100	0.869
comM	Acinetobacter baylyi ADP1	82.386	100	0.824
pilM	Legionella pneumophila strain ERS1305867	41.243	100	0.415