Detailed information NTG1006821

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: ABLC00_RS17055
• Genome accession: NZ_CP157432
• Coordinates: 3643129..3644187 (-)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain XH1679
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3638129..3649187

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLC00_RS17030 (ABLC00_17030)	aroK	3638401..3638970 (-)	570	WP_006582544.1	shikimate kinase AroK	-
ABLC00_RS17035 (ABLC00_17035)	pilQ	3638982..3641147 (-)	2166	WP_004711661.1	type IV pilus secretin PilQ family protein	Machinery gene
ABLC00_RS17040 (ABLC00_17040)	pilP	3641210..3641737 (-)	528	WP_006582542.1	pilus assembly protein PilP	Machinery gene
ABLC00_RS17045 (ABLC00_17045)	pilO	3641748..3642488 (-)	741	WP_006582541.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABLC00_RS17050 (ABLC00_17050)	pilN	3642485..3643129 (-)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
ABLC00_RS17055 (ABLC00_17055)	comM	3643129..3644187 (-)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
ABLC00_RS17060 (ABLC00_17060)	ponA	3644350..3646908 (+)	2559	WP_006582540.1	penicillin-binding protein PBP1a	-
ABLC00_RS17065 (ABLC00_17065)	-	3646926..3647750 (-)	825	WP_006582539.1	putative RNA methyltransferase	-
ABLC00_RS17070 (ABLC00_17070)	-	3647753..3648085 (-)	333	WP_002051722.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=1006821 ABLC00_RS17055 WP_004711654.1 3643129..3644187(-) (comM) [Acinetobacter nosocomialis strain XH1679]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1006821 ABLC00_RS17055 WP_004711654.1 3643129..3644187(-) (comM) [Acinetobacter nosocomialis strain XH1679]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGTGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGATGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATCGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426