Detailed information NTG1006817

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ABLC00_RS17035
• Genome accession: NZ_CP157432
• Coordinates: 3638982..3641147 (-)
• Length: 721 a.a.
• NCBI ID: WP_004711661.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain XH1679
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3633982..3646147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABLC00_RS17020 (ABLC00_17020)	-	3636399..3637274 (-)	876	WP_002051731.1	hypothetical protein	-
ABLC00_RS17025 (ABLC00_17025)	aroB	3637290..3638372 (-)	1083	WP_006582545.1	3-dehydroquinate synthase	-
ABLC00_RS17030 (ABLC00_17030)	aroK	3638401..3638970 (-)	570	WP_006582544.1	shikimate kinase AroK	-
ABLC00_RS17035 (ABLC00_17035)	pilQ	3638982..3641147 (-)	2166	WP_004711661.1	type IV pilus secretin PilQ family protein	Machinery gene
ABLC00_RS17040 (ABLC00_17040)	pilP	3641210..3641737 (-)	528	WP_006582542.1	pilus assembly protein PilP	Machinery gene
ABLC00_RS17045 (ABLC00_17045)	pilO	3641748..3642488 (-)	741	WP_006582541.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABLC00_RS17050 (ABLC00_17050)	pilN	3642485..3643129 (-)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
ABLC00_RS17055 (ABLC00_17055)	comM	3643129..3644187 (-)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77824.16 Da
• Isoelectric Point: 6.5404

>NTDB_id=1006817 ABLC00_RS17035 WP_004711661.1 3638982..3641147(-) (pilQ) [Acinetobacter nosocomialis strain XH1679]
MNQVFRQFSMGAVAVAIMQAASAQVSMTNIVPTQVAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFDKAQQSLKQSKI
AVATNEASSVDVTSDDQRSRLTVNLKDAGAFTTRVEGNTFILKINSVQPNNKPVPVVTAQPQGISNIGFQRGSQGEGLVV
VDLLGSNTPVDVQQQGSKVVIRTLGTKIPAHLARRLNVNDFATPVSSIDAYNDKGAGVITIQSSGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNSNGLQHTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNKNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQTAKVATGQQVPYQTTTNSAAGSTATTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPN
GELILNKNNINTNVLVDNGETVILGGVFEQTTTNSQTKVPFFGDIPVVGHLFRKDVKSDDKQELLIFVTPRIVNDTLARN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=1006817 ABLC00_RS17035 WP_004711661.1 3638982..3641147(-) (pilQ) [Acinetobacter nosocomialis strain XH1679]
ATGAATCAGGTATTCCGTCAGTTTTCTATGGGGGCTGTAGCTGTTGCAATTATGCAGGCTGCATCTGCACAGGTCAGCAT
GACCAATATAGTACCAACGCAAGTTGCAGGTCAGGGCACAGAAATTAGAGTTATGTTTAATGGATTGCCACCACAGCCAC
AGGCTTACCAACTTGAAAATCCGTCACGTTTAATATTAGATTTTGATAAAGCTCAACAAAGTTTAAAACAGTCTAAAATT
GCTGTTGCGACCAATGAAGCAAGCTCTGTAGATGTAACTTCAGATGATCAACGTTCACGTTTGACTGTAAATTTAAAAGA
TGCTGGAGCGTTTACAACACGTGTGGAAGGTAATACTTTCATTTTAAAAATTAATTCGGTCCAACCGAATAATAAACCTG
TACCAGTAGTTACTGCACAACCACAAGGTATTTCAAACATTGGATTTCAGCGTGGTAGTCAGGGAGAAGGTTTAGTTGTT
GTGGATCTTTTGGGAAGTAATACACCTGTAGATGTTCAACAACAAGGCAGTAAAGTTGTTATAAGAACTTTAGGTACAAA
AATTCCGGCACATTTGGCGCGTCGTCTAAATGTAAATGATTTTGCAACACCAGTCTCAAGTATTGATGCTTATAATGATA
AAGGTGCTGGTGTAATTACTATTCAGTCATCTGGTAGCTACGAATACATGGCATATCAGGCTGAAAATAAGCTCACAATC
AGTTTGAAACGACCACAAGATAAAAATGTAACTTCTCTATATAAAACGCCAAATTATTCTGGAAATAAGCTTTCGCTAGA
TTTTCAAGACATCGAAGTGCGCCGTGTTTTACAGCTCCTTGCTGATTTTACGGGAATCAATATGGTGGCTGCTGATAGTG
TGCAAGGTAATATCACGCTACGTTTAAAAGATGTACCTTGGGATCAGGCTCTGGATATTATTTTAAAAACTAAAAATCTT
GATAAACGTCGTAATGGGAATGTGATTTGGATTGCTCCTGTTGCAGAGTTGATTAAAGCGGAAGAGGAAGAAGCAAAAGC
TGTAGCGCAAAGTGTAAAACTTGCTCCGTTACAGACAGAGTATATTCAACTTAAATACGCTAAAGCTGGCGATATTATGG
GTTTAATTACTCAAGGCTCAAATAATAGTAATGGCTTACAACATACTTCTGGTGGAGGAACTTCAACTTCAACCAATTTA
AATACTGGCGTTGATAGTCTTGGGAATAATGTGGGTAGTTTACTTAGCCCTCGCGGTACCATTACTCAAGATGACCGAAC
TAATACTCTTATTATTAATGATACTGCTCAGTCGATTGATCAAATTCGAAAAATGATTGACTTGCTTGATGTGCAAGTTA
AACAGGTTATGGTTGAAGCACGTATTGTGAGAGCGTCTACGTCGTTTACCAAAGAACTTGGTGTGAAGTGGGGCATTCTT
TCGCAAGGTATTACCAATAATAAAAATTTGTTGGTTGGTGGTAGTGAAACAACTTTATGGAATCTGCGCGAACCTAAAAA
AGATGAAACTACAGGTGGCTATAAATATACGATTGAGCGCCCAGATAATTTAAACGTTGATTTGGGGGTTTCTAATCCTG
CCGGTAGTATTGCCTTTGGTCTTATTAGTATGTCGGACTTCATGTTGGATCTTGAGCTCTCAGCTTTACAAGCCGATGGT
TATGGTGAAGTAATTTCAACGCCTAAAGTGATGACCGCCGATAAGCAAACTGCGAAAGTAGCAACAGGTCAACAAGTTCC
ATATCAAACTACGACAAATTCTGCTGCAGGCTCAACAGCTACAACATCATTTAAAGATGCATTACTAAGCCTAAATGTAA
CTCCAAGTATTACGCCTGACGGTAAGATTCAAATGAAATTGGATATTTCTAAGGACTCTGTAGCAGGTGCGGCCCCAAAT
GGTGAATTAATTCTGAATAAGAATAATATTAATACCAATGTGCTGGTTGATAATGGAGAGACCGTTATTTTAGGTGGTGT
ATTCGAGCAAACAACGACGAATTCTCAAACCAAAGTTCCGTTTTTTGGTGATATTCCTGTTGTAGGGCATTTATTTAGAA
AAGATGTAAAGTCTGATGATAAGCAAGAATTATTGATTTTCGTAACACCACGAATTGTTAATGACACTTTAGCGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

• AMIN domain (AMIN) (38-121)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	97.365	100	0.974
pilQ	Acinetobacter baumannii strain A118	97.226	100	0.972
comQ	Acinetobacter baylyi ADP1	75.104	100	0.753
pilQ	Pseudomonas aeruginosa PAK	39.702	100	0.406