Detailed information NTG1006076

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABI198_RS09660
• Genome accession: NZ_CP157344
• Coordinates: 2059592..2060293 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00537
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2054592..2065293

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABI198_RS09630 (ABI198_09630)	-	2054898..2055341 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABI198_RS09635 (ABI198_09635)	tadA	2055411..2055914 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABI198_RS09640 (ABI198_09640)	-	2055921..2057045 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABI198_RS09645 (ABI198_09645)	ung	2057042..2057755 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABI198_RS09650 (ABI198_09650)	-	2057806..2058402 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABI198_RS09655 (ABI198_09655)	gspK	2058633..2059592 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABI198_RS09660 (ABI198_09660)	xcpW	2059592..2060293 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABI198_RS09665 (ABI198_09665)	xcpV	2060293..2060673 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABI198_RS09670 (ABI198_09670)	-	2060663..2061217 (-)	555	WP_000841373.1	type II secretion system protein	-
ABI198_RS09675 (ABI198_09675)	-	2061227..2061835 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABI198_RS09680 (ABI198_09680)	-	2061873..2062646 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABI198_RS09685 (ABI198_09685)	-	2062664..2063005 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABI198_RS09690 (ABI198_09690)	-	2063017..2063997 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABI198_RS09695 (ABI198_09695)	kdsB	2064009..2064770 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1006076 ABI198_RS09660 WP_000594589.1 2059592..2060293(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00537]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1006076 ABI198_RS09660 WP_000594589.1 2059592..2060293(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00537]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996