Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   FGL14_RS04445 Genome accession   NZ_LR594045
Coordinates   833650..833832 (+) Length   60 a.a.
NCBI ID   WP_138083826.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 828650..838832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL14_RS04415 (NCTC9413_00912) - 828684..829295 (+) 612 WP_138083822.1 hypothetical protein -
  FGL14_RS04420 (NCTC9413_00913) - 829305..829760 (+) 456 WP_138083823.1 phage holin family protein -
  FGL14_RS11595 (NCTC9413_00914) - 829762..829884 (+) 123 WP_012767012.1 hypothetical protein -
  FGL14_RS04425 (NCTC9413_00915) - 829872..831068 (+) 1197 WP_138083824.1 glucosaminidase domain-containing protein -
  FGL14_RS04430 (NCTC9413_00916) - 831465..831977 (+) 513 WP_012767010.1 PBECR4 domain-containing protein -
  FGL14_RS04435 (NCTC9413_00917) - 832166..832366 (+) 201 WP_138083825.1 CsbD family protein -
  FGL14_RS04440 (NCTC9413_00918) - 832428..833417 (-) 990 WP_050443212.1 DNA/RNA non-specific endonuclease -
  FGL14_RS04445 (NCTC9413_00919) prx 833650..833832 (+) 183 WP_138083826.1 Paratox Regulator
  FGL14_RS04450 (NCTC9413_00920) - 834277..835191 (+) 915 WP_046159617.1 LysR family transcriptional regulator -
  FGL14_RS04455 (NCTC9413_00921) lspA 835188..835646 (+) 459 WP_003056252.1 signal peptidase II -
  FGL14_RS04460 (NCTC9413_00922) - 835636..836529 (+) 894 WP_015057489.1 RluA family pseudouridine synthase -
  FGL14_RS04465 (NCTC9413_00923) - 836656..837269 (-) 614 Protein_818 VTT domain-containing protein -
  FGL14_RS04470 (NCTC9413_00925) pyrR 837548..838069 (+) 522 WP_003050221.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7204.10 Da        Isoelectric Point: 4.4217

>NTDB_id=1005665 FGL14_RS04445 WP_138083826.1 833650..833832(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MLTYDEFKQAIDDRYITGHTVAIVRKNGQIFDYVLSNEKIRDWEVVTEERVEDVLRELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1005665 FGL14_RS04445 WP_138083826.1 833650..833832(+) (prx) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGCTAACATACGATGAGTTTAAGCAAGCTATTGATGACAGATATATCACAGGACATACAGTGGCGATCGTGCGCAAAAA
CGGACAGATTTTTGATTATGTGTTGTCGAATGAGAAGATAAGAGATTGGGAGGTTGTGACAGAGGAGAGAGTAGAAGACG
TGTTGAGGGAATTAGACAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

81.667

100

0.817

  prx Streptococcus pyogenes MGAS315

73.333

100

0.733

  prx Streptococcus pyogenes MGAS8232

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

71.667

100

0.717

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

  prx Streptococcus pyogenes MGAS315

73.81

70

0.517


Multiple sequence alignment